Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14196g00004 ATGGCTACCATTTTCGCTTTCATTTTCATATTTTTCTCCCTCATCGCCTCCAACTATGCCTTCGATTCCTTGGATCCTTTTGGTAACATCACCATCACATGGGATTATTTCTCCGACAACGGGGACACAGTCGACGTGAGGGTATCGATATACAACTTCCAACTATTTCGTCACGTGGAGGAGCCTGGTTGGAGATTGGGTTGGGCATGGAAAGGTGACGAGGTGATTTGGTCAATGCTGGGAGCAGAGGCAAAGGAGCAAGGGAACTGCACAAGATTTAGAGGACAACAGAAACCACATTGTTGCAAGAAAGAACCAGTTATCATTGATCTAATGCCTGGAACCCCCTACAACATGCAGACCGCAAATTGCTGCAAAGCTGGGATCCTTACATCCCTTAAACAAGATCATACAAAACTTGGTGCCACCTTCCAAATGAATTATGTCAAACCATCCGATTCAGGTCCCGGTTTTACCATGCCAGAAAATTTCACCCTTGGAATTCCAGGCTATAGCTGTGGGACACCGTTTCAAGTCCCGCCGACCATGTTTACCAAAGACGGACACAGATGGCAACAAGTCTTGGAGACTTGGAATGTGACTTGTATTTACTCCCAGTTTCTAGCATCACCTGCTCCAAAATGCTGCGTCTCTCTGTCTGCATTCTACAACAGTACTATTGTTCCTTGTCCCACATGCAGTTGCAATTGCCAAGGACTACCGGGAGCAACTTGTGTGGATTCAGATAAGACTTCAGTGTTGCAACCACCGCAAACAAATCGCGGAGAAGCAGCAGCAGCGGTGATCAGGTGTTCGCATCACATGTGCCCCATTCGTATTCACTGGCATGTGAAACAAAGTTACAAAGAGCATTGGCGGGTGAAGATCACAATCACAAACATGAACTTTGTGAAAAACTATTCCCAATGGAATTTGGTGGTGCAGCATCCTAACTTAGCGAATGTAACACAAGTGTTCAGTTTCAACTACGAACCTCTGACAGTTTATGGAAAATTGAGAGACATAGGGATGTTTTGGGGGCTGGCGTATTACAATGACATGCTGCTGACACATGGAGAGAATGGGAATGTGCAAACAGAGGTTTTACTGCATAAAGATAGAGGAAAGTTCAGCTTCAGAGAAGGGTGGAGTTTTCCTAGAAAAGTTTCGTTCAATGGCGATGAATGTGTGATGCCGTCTCCTGATGCATATCCTAGACTTCCCAACGCAGCTCATGTTGCCATAACAAGCTTTAACACAATTCTCTTTTCACTGTTACTTATACTCTTATAG 1293 0.4486 MATIFAFIFIFFSLIASNYAFDSLDPFGNITITWDYFSDNGDTVDVRVSIYNFQLFRHVEEPGWRLGWAWKGDEVIWSMLGAEAKEQGNCTRFRGQQKPHCCKKEPVIIDLMPGTPYNMQTANCCKAGILTSLKQDHTKLGATFQMNYVKPSDSGPGFTMPENFTLGIPGYSCGTPFQVPPTMFTKDGHRWQQVLETWNVTCIYSQFLASPAPKCCVSLSAFYNSTIVPCPTCSCNCQGLPGATCVDSDKTSVLQPPQTNRGEAAAAVIRCSHHMCPIRIHWHVKQSYKEHWRVKITITNMNFVKNYSQWNLVVQHPNLANVTQVFSFNYEPLTVYGKLRDIGMFWGLAYYNDMLLTHGENGNVQTEVLLHKDRGKFSFREGWSFPRKVSFNGDECVMPSPDAYPRLPNAAHVAITSFNTILFSLLLILL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14196g00004 430 Pfam COBRA-like protein 46 205 IPR006918 GO:0010215|GO:0016020
Vium14196g00004 430 PANTHER PROTEIN COBRA 7 425 IPR006918 GO:0010215|GO:0016020
Vium14196g00004 430 PIRSF COBRA 1 430 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14196g00004 Vium-Chr14196 12492 14604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14196g00004 5 430 COBRA Gene Family AT3G29810 51.147 9.20e-163 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14196g00004 - - lang:109329241 675.626