Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1417g00014 ATGGACAACTATGGAGAAAGTGATGCGCTGAAGAAGAAGAAGAAGAGCGATGCGCTCACGGTGCAGTTCCGTCAGATCCTGAAGAAGATTGTCACCGCGAAGGAGTCCATGGGCGACATCACGAAAACCTCGTCGTTCGCGCTCACCGAGGCCAAGTACGTCGCCGGCGACAATATCAAACACGTGGTCCTCGAGAATGTCCGGGAAGCCTCCCTCCGCGTCCGCTTGCGCCAGGAAAATGTCGCCGGTGTCAAGCTCCCCAAGTTCGAGTACACCTCCGACGCTGACGCCAACAAGAACGACCTCACCGGACTGGCGCGGGGCGGCCAGCAGGTGCAGCACTGTCGTGCCGCCTACATCAAGGCCATCGAGGTTCTCGTCGAGCTCGCCTCGCTTCAGACCTCGTTCCTCACTCTCGATGAGGTTATCAAGACCACGAATCGTAGGGTTAACGCTCAGGAGAATGTGGTGAAGCCGCGGTTGGAGAATACGATTAGTTACATCAAGGGGGAGTTGATGAGCTTCGAGAGGGAAGATTTCTTCGGGCTGAAGAAGATTCAGGGGTATAAGAAGAGGGAGATTGAGAAGCAGATGTTGTTGAAGAAGGTTGAGTCTAATTTACCTCTGCACAAAGCGGTTTCTTACAATTCCTCTCATTTGTTGGCTGTGGGTGACAAAGATGAGGATATTATCTTCTAA 699 0.5308 MDNYGESDALKKKKKSDALTVQFRQILKKIVTAKESMGDITKTSSFALTEAKYVAGDNIKHVVLENVREASLRVRLRQENVAGVKLPKFEYTSDADANKNDLTGLARGGQQVQHCRAAYIKAIEVLVELASLQTSFLTLDEVIKTTNRRVNAQENVVKPRLENTISYIKGELMSFEREDFFGLKKIQGYKKREIEKQMLLKKVESNLPLHKAVSYNSSHLLAVGDKDEDIIF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1417g00014 232 Gene3D - 10 198 - -
Vium1417g00014 232 Pfam ATP synthase subunit D 13 187 IPR002699 GO:0046961
Vium1417g00014 232 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 13 232 IPR002699 GO:0046961
Vium1417g00014 232 NCBIfam V-type ATP synthase subunit D 13 191 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1417g00014 Vium-Chr1417 40090 42287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1417g00014 13 232 Primary Pumps ATPases(2) AT3G58730 71.491 1.18e-111 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1417g00014 K02149 - gmx:100801612 370.163