Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14151g00006 ATGGAGTCGCGAGTGCTGTCACGCGCCGGAGCCTTCTCCTCCCTCGCTCACCTCCGCAAGTCTCCGCGGGACGTCGCTGGCGGTGCCTCCTTCGTCACGGTGAAGACCGTGGGGTCCCTTGCGGAAGGTGGGAATCTGATTTGGGGGAGGCAGCTGCGTCCGGAGCTCTGCTCGCCGGCGCTGAAGAAGGAGGCCGTCCTCCTCCGACCTTGCCTTGCCGCCACCTCCTCACCGGCCGAGGGTGGTGATTCCGCCGGGGAAAAGGTTGCTCCCGCGGGATTCTTCGACAAATACCCCGCTCTTGTCACAGGGTTTTTCTTCTTCACGTGGTACTTCTTGAACGTGATTTTCAACATCCTCAACAAGAAGATCTACAACTATTTCCCCTATCCGTACTTCGTATCCGTCATCCATTTATTCGTCGGTGTGGTGTACTGTTTGGCGAGCTGGACCGTGGGCCTTCCTAAGCGTGCTCCTATAGACTCCAACCTGCTGAAGTTGCTCATTCCGGTGGCTGTGTGCCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACGCATACCATTAAAGCTCTTGAACCATTCTTCAATGCTGCTGCTTCACAGTTCATCCTTGGCCAATCCATTCCCATCACTTTGTGGCTGTCTCTGGCTCCCGTTGTTATTGGTGTGTCCATGGCATCTTTGACCGAGCTCTCATTCAACTGGGTTGGCTTCATAAGTGCTATGATTTCAAACATTTCCTTCACCTACCGGAGCATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATATCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCTCCTGCAGTAATTGTGGAAGGCCCTGCTCTGTTGAAGCACGGCTTCAATGATGCTATTGCTAAAGTAGGTTTGGTCAAGTTCGTCTCAGATCTCTTCTGGGTTGGGATGTTTTACCATCTCTACAACCAGGTGGCTACCAACACTCTTGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGGAACGTACTGAAACGTGTATTTGTGATTGGATTTTCAATTATAGTCTTCGGTAACAAGATTAGCACCCAAACTGGTATAGGAACAGCCATTGCAATTGCTGGAGTGGCACTCTACTCTCTCATCAAAGCCAGGATGGAGGAAGAGAAACGACAAGCGAAAGCAGCATAA 1218 0.5066 MESRVLSRAGAFSSLAHLRKSPRDVAGGASFVTVKTVGSLAEGGNLIWGRQLRPELCSPALKKEAVLLRPCLAATSSPAEGGDSAGEKVAPAGFFDKYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWTVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPAVIVEGPALLKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTAIAIAGVALYSLIKARMEEEKRQAKAA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14151g00006 405 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 399 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vium14151g00006 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 238 - -
Vium14151g00006 405 Pfam Triose-phosphate Transporter family 102 389 IPR004853 -
Vium14151g00006 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 391 - -
Vium14151g00006 405 PANTHER SOLUTE CARRIER FAMILY 35 104 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14151g00006 Vium-Chr14151 89649 94273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14151g00006 1 403 Antiporters AT5G46110 77.482 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14151g00006 K15283 - gmx:732611 740.725