Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14151g00001 ATGACATGGTGCAATGACTCAGATGAGGAGAGGGGAATTGAACTGGTTGCGCCCACTGTTACTCCTGCAACTAACAACACTCTTGTTACTGACACAAAACAAACCGAAAATCGCACCATAACTTGCCCCTCATGTGGCCATAACATTGAATTCCAAGATCAGACAGGAATCAATGACTTGCCGGGGTTACCATCTGGTGTGAAATTTGATCCGAATGACCAAGAGATATTAGAGCATTTGGAAGCAAAGGTACTTTCTGATGTTCCCAAGCTCCATCCCCTCATTGATGAGTTCATACCAACGCTTGAAGGGGAGAACGGGATCTGTTACACACACCCAGAAAAGCTTCCAGAGTTGCAGGTGTAA 366 0.4536 MTWCNDSDEERGIELVAPTVTPATNNTLVTDTKQTENRTITCPSCGHNIEFQDQTGINDLPGLPSGVKFDPNDQEILEHLEAKVLSDVPKLHPLIDEFIPTLEGENGICYTHPEKLPELQV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14151g00001 121 ProSiteProfiles NAC domain profile. 63 121 IPR003441 GO:0003677|GO:0006355
Vium14151g00001 121 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 21 118 IPR044799 GO:0003700
Vium14151g00001 121 Pfam No apical meristem (NAM) protein 64 118 IPR003441 GO:0003677|GO:0006355
Vium14151g00001 121 SUPERFAMILY NAC domain 58 119 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14151g00001 Vium-Chr14151 22645 25262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14151g00001 1 117 NAC Transcription Factor Family AT4G28500 59.829 3.00e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14151g00001 - - vum:124822340 257.299