Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1413g00014 ATGCTAATTCGTAAACGGGCTGAGCAAAGTGAAGTAGCTGCTAACTATGTCAAAGTTGTTGATGAAGAAGGTTTCAACTCTCCTGAATATAACAATTTTAATGGAATAGTCAAACCACCACCTATTGGGCGTTTCACAGAATGGCATAAAATAACCTTCCACAATGGTGTTGGTTTTGAAAATGGAAATGGCTTAGAGTCCAGTGAGCAAGGTTTTGCCATTGGAGGTCAAGAGCGGTTAAGTCGAATGCATGGTTACTTGTCAGAGTTGGCTGCTGCTGCTTTTGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGACGGGATGGGAACAATGGTGGCTAGTGATCTTTATGAAGGCACTCGGACAGCAGAGGTGAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGTATCTGGCATATTGGTTAAGCGGACTGATGATGAGCTCTTGCAAACATTGGATTCATTCGTTGTTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCCTTTTTCCTCACTTTGAGGAGAAGTGCGGGGAAGTTGCTTGCATTGCAGTATCTCCTGATTGTCGTGGTCAAGGACAGGGTGACAAAATGCTTGATTATATGGAGAAGAAAGCATCGTATCTGGGACTGAATATGCTTTTCCTGCTAACTACACGCACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCTATTGATTATATTCCTGAAAAGAAAAGGAGAAAGATCAATCTTTCTCGCAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAAAGTGGAATTACTGTTGGTGTAAAATCTGATTCAAGTTAG 894 0.4049 MLIRKRAEQSEVAANYVKVVDEEGFNSPEYNNFNGIVKPPPIGRFTEWHKITFHNGVGFENGNGLESSEQGFAIGGQERLSRMHGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEVSGILVKRTDDELLQTLDSFVVVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKMLDYMEKKASYLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRKINLSRNSKYYMKKLLPNKSGITVGVKSDSS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1413g00014 297 SUPERFAMILY Carbamate kinase-like 83 131 IPR036393 -
Vium1413g00014 297 CDD NAT_SF 176 238 - -
Vium1413g00014 297 NCBIfam amino-acid N-acetyltransferase 89 281 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vium1413g00014 297 Gene3D - 60 132 IPR036393 -
Vium1413g00014 297 Pfam Acetyltransferase (GNAT) family 172 240 IPR000182 GO:0016747
Vium1413g00014 297 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 135 283 IPR000182 GO:0016747
Vium1413g00014 297 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 138 285 IPR016181 -
Vium1413g00014 297 Gene3D - 134 281 - -
Vium1413g00014 297 PANTHER AMINO-ACID ACETYLTRANSFERASE 1 289 IPR010167 GO:0004042|GO:0005737|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1413g00014 Vium-Chr1413 37098 43422 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium1413g00014 Acetyltransf_1 4.1e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1413g00014 K14682 - gmx:100777694 551.206