Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14105g00002 ATGCCTCATTCTTCTTCTTCTTCTTCTCCCGTTTCAACCATTTCCAATCTCCGTATTCGCGCCCTAATACTTTGGTCCTCCAAGAACTACGCAATAGCTGCATTCGTTTTCCTCCTACTCTTCTCCCTCACTCTCTTCTCTCACTTGGATTCCCGTTCCCGTTCGCATTCCCGTTACCCCTCCCATCCACGCTCCACCCTCGTTCCCTTAACGCTCCTCCATAACGCCAACCGAACGCGCGCGCTTTGCTTGGACGGGAGCGCCCCCGGTTACCACTTCCAAAGCGGGTTCGGATCCGGATCTCTCAATTGGTTGCTCCACATTGAGGGAGGAGGGTGGTGCAATTCAATAGCTTCATGTACTCAACGAAAATTCACCCATTTGGGGTCTTCCAATTATATGGAAAAAAGTATTCCTTTTTCAGGAATACTGAGCTCTGACCCCTCTCAAAACCCAGATTTCTTTAACTGGAACAAGGTGAAGATTCGCTATTGTGATGGTGCATCTTTTGCTGGTCACCCCGAGAGCGAGAGAGGAAGTGAGTTATTGTTCAGAGGCCAGGTCATATGGGAAGCTATTATGGATGAACTCTTATCAATTGGCCTGTCCAAAGCAAAGCAGGCGTTGCTCTCAGGATGCTCTGCTGGAGGGTTAGCAGCTCTTATACACTGTGACAACTTCCGGCAATTACTTCCAAAAGAAGCAACTGTTAAGTGCCTTTCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTAGCGGAAACAGTACAATGAGATCCTTCTATCATGATGTTACCCAGCTGCAGGGTCTTGCAAAAAGTTTGCACAAAGATTGCATTGATAAAATGGAACCATACAAGTGTCTGTTTCCACAAGAAATTGTTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCGTATGATTTCTGGCAGATACGCAATATCTTGGTACCTCAAGGATCAGATCCCCTTGGTCACTGGCAAAGCTGCAGACAGAATATTCGCAATTGTAATGCTAACATGATTGATAAACTTGATGGTTACCGTGGCTCTTTGCTGAAGACTTTGAATGACTTCCAACAACGAAAAGAGATGGGAATGTTTATAAATTCCTGCTTTATCCATTGCCAAACTGAGATGGAAGTAACGTGGCATTCATCCAACTCTCCTAAAATAAATGATAAGACAATTGCTGAATCTGTTGGTGATTGGTACTTTGATCGAGAAGCTGTAAAGCGTATTGATTGCTCTTCTTTTCCCTGCAATCCCACTTGCCACAATATGGATCTCACTTGA 1302 0.447 MPHSSSSSSPVSTISNLRIRALILWSSKNYAIAAFVFLLLFSLTLFSHLDSRSRSHSRYPSHPRSTLVPLTLLHNANRTRALCLDGSAPGYHFQSGFGSGSLNWLLHIEGGGWCNSIASCTQRKFTHLGSSNYMEKSIPFSGILSSDPSQNPDFFNWNKVKIRYCDGASFAGHPESERGSELLFRGQVIWEAIMDELLSIGLSKAKQALLSGCSAGGLAALIHCDNFRQLLPKEATVKCLSDAGFFLDEKDISGNSTMRSFYHDVTQLQGLAKSLHKDCIDKMEPYKCLFPQEIVKNIKTPLFLVHPAYDFWQIRNILVPQGSDPLGHWQSCRQNIRNCNANMIDKLDGYRGSLLKTLNDFQQRKEMGMFINSCFIHCQTEMEVTWHSSNSPKINDKTIAESVGDWYFDREAVKRIDCSSFPCNPTCHNMDLT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14105g00002 433 Pfam Pectinacetylesterase 65 411 IPR004963 GO:0016787
Vium14105g00002 433 PANTHER NOTUM-RELATED 40 430 IPR004963 GO:0016787
Vium14105g00002 433 SUPERFAMILY alpha/beta-Hydrolases 172 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14105g00002 Vium-Chr14105 18505 29919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14105g00002 15 398 Carbohydrate Esterase AT3G09410 57.069 4.39e-164 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14105g00002 K19882 - gmx:100792819 728.013