Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14073g00001 ATGTCAGATCAATCTTCGCTTGAAACTGAGGCAAGAATATCTTCTGTGATCTATGAAAAGAAGAAATTGTTCAATGACTTATTGACATCTAAAGGTAACATAAGGGTATTCTGCCGAGCTAGGCCATTATTTGAAGATGAAGGTTTCTCAGTTGTTGAATTTCCAGATGATTATACCATACGAGTAAATACTGGCGATGAATCCTTGTCTAACTCAAAGAAAGAATTTGAATTTGACAGAGTTTACGGACCTCATGTTGGACAGGCTGAGTTGTTCAGTGATGTTCAACCAATGGTGCAATCAGCTTTGGATGGATATAATATTTCCTTATTTGCATATGGACAAACACATTCTGGAAAAACACACACTATGGAAGGATCAAGCTATGATAGGGGATTATATGCTCGTTGCTTTGAGGAGTTGTTTGACTTGTCCAACTTGGACACAACTGCTACTTCTCAATATACATTCTGCGTTACTGTTTGTGAGCTCTATAACGAACAGATAAGGGATCTGATCTTGGAGTCAGGGAAAAACTTGCCTAAACTGTGTTTAGCTTCACCTGAATATCTCATAGAACTAATGCAGGAAAAAGTTGATAACCCTATGGAATTTTCTAGGGTTTTGAAAGCTGCATTTCAGAGTCGAGGAAATAATCCATTAAAGATTAATGTTTCTCATTTGATTGTTACCATACACATATTTTATAACAATTTGATCAGCGGTGAAAACTCATATAGCAAGTTGTCTCTGGTTGATTTGGCTGGAAGTGAAGGTTTGATATCAGAAGATGATAGTGGTGAGCGTGTCACAGATATGCTTCATGTTATGAAGTCACTTTCAGCGCTGGGAGATGTATTATCTTCTTTGACATCAAAAAAGGATGTTATTCCTTATGAAAACTCAGTGTTGACGAAACTACTTGCAGATTCTCTTGGTGGAAGTTCAAAATCTCTGATGATTGTAAATGTGTGTCCAAATTCTTCGAATTTATCTGAGACATTACTGTCTCTCAATTTCTCTGCCAGAGCTCGTAATTCTGTCTTAAGCCTTGGAAATCGAGATACAATTAAGAAGTGGAGAGATGTTGCAAATGATGCACGTAAAGAGTTATATGAGAAGGAAAAAGAAATCCAAGATCTCAAACAAGACGGTCTGAGACTTAAGCAAGCACTTAGAGATGCAAATGATCAGTGTGTTCTACTCTTCAATGAAGTACAAAAGGCATGGAAAGTTTCGTCTGCATTGCAGACAGATTTAAAGGCAGAGCATATTTTGCTGGCTGATACTTATAAGGCAGAGAAAGAAGAAAATTCTCAGCTTAGAAATCAAGTTGCTCATATGTTACAGTTAGAAAAAGCACAAAATTTGCAGATACAACAGCGCGATTCAACCATTAAAAGTTTGGAGGTTAATATTTAG 1422 0.3685 MSDQSSLETEARISSVIYEKKKLFNDLLTSKGNIRVFCRARPLFEDEGFSVVEFPDDYTIRVNTGDESLSNSKKEFEFDRVYGPHVGQAELFSDVQPMVQSALDGYNISLFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLSNLDTTATSQYTFCVTVCELYNEQIRDLILESGKNLPKLCLASPEYLIELMQEKVDNPMEFSRVLKAAFQSRGNNPLKINVSHLIVTIHIFYNNLISGENSYSKLSLVDLAGSEGLISEDDSGERVTDMLHVMKSLSALGDVLSSLTSKKDVIPYENSVLTKLLADSLGGSSKSLMIVNVCPNSSNLSETLLSLNFSARARNSVLSLGNRDTIKKWRDVANDARKELYEKEKEIQDLKQDGLRLKQALRDANDQCVLLFNEVQKAWKVSSALQTDLKAEHILLADTYKAEKEENSQLRNQVAHMLQLEKAQNLQIQQRDSTIKSLEVNI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14073g00001 473 ProSitePatterns Kinesin motor domain signature. 247 258 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vium14073g00001 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 383 IPR027417 -
Vium14073g00001 473 Coils Coil 357 398 - -
Vium14073g00001 473 FunFam kinesin-like protein KIN-14B isoform X1 1 348 - -
Vium14073g00001 473 PRINTS Kinesin heavy chain signature 105 126 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium14073g00001 473 PRINTS Kinesin heavy chain signature 248 266 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium14073g00001 473 PRINTS Kinesin heavy chain signature 297 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium14073g00001 473 ProSiteProfiles Kinesin motor domain profile. 33 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium14073g00001 473 PANTHER KINESIN-LIKE PROTEIN KLP-3 12 353 IPR027640 GO:0003777|GO:0007018
Vium14073g00001 473 Coils Coil 431 451 - -
Vium14073g00001 473 SMART kinesin_4 31 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium14073g00001 473 Gene3D Kinesin motor domain 1 347 IPR036961 -
Vium14073g00001 473 Pfam Kinesin motor domain 40 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14073g00001 Vium-Chr14073 2536 10422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14073g00001 20 348 Calmodulin-binding Proteins AT5G65930 35.777 3.66e-53 191