Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1405g00035 ATGAGCTTACCGTTAGATGTTGTGCCCACCATAGTTGTTTCTTTACCCAAAGCTGCTCAACTCTTCCTCAAGACCCATGATCTTATCTATGCCAGTAGACCACCTCTTGAAGTTGCAAAGTACATCGCTTGGGAGCAGAAGAACTTAGCTTTTGCTCAATATGGTTCTTACTGGCGCAACACTTGTAAGATGTGCATGTTAGAATTACTAAACCAAGCCAAAATTAACTACTTTAGATCCTTGAGGGATGCAGAACTAGACCTGTTGGTGAAGCATCTGAGAGAGGCAGCCAAGGATGGAGCTGTGGTTGATCTAAGTGCCAAAGTTGCAGCACTCATTGCAGACACTGCTTGCAGAATGATTTTAGGGAAGAAGTACATGGACCAGGACTTGGATGAGAAGGGTTTCAAGGCCGTGATGACAGAGATAATGTACTTGGCAGCAACTCCTAACATAGGCGATTACATTCCTTACATCGGTAAACTTGACCTTCAAGGGCTAATCAAGCGAATGAAGGCAATGCGAAAAGTCTTCGATGAATTCATTGACAAAATAATCGATGAGCATATTGAATCAAAGAAGGAGGAGAACAAGGTGAAGGACTTTGTCGACGTGATGTTGGGATTACTCGGTACTGAAGAATCGGAGTACTGCGTTGAAAGACCCATTATCAAAGCCATATTGCTGGATATTTTAGCTGGTTCAATAGATACTTCTGCTACAACAATAGAGTGGGCACTTTCGGAGCTGATAAAGAATCCAAGGGTGATGAAGAAACTCCAAATTGAACATACTTATATTGTGTTGATATATTTAGGTGGACTAAAGCTTCTTTGA 837 0.4182 MSLPLDVVPTIVVSLPKAAQLFLKTHDLIYASRPPLEVAKYIAWEQKNLAFAQYGSYWRNTCKMCMLELLNQAKINYFRSLRDAELDLLVKHLREAAKDGAVVDLSAKVAALIADTACRMILGKKYMDQDLDEKGFKAVMTEIMYLAATPNIGDYIPYIGKLDLQGLIKRMKAMRKVFDEFIDKIIDEHIESKKEENKVKDFVDVMLGLLGTEESEYCVERPIIKAILLDILAGSIDTSATTIEWALSELIKNPRVMKKLQIEHTYIVLIYLGGLKLL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1405g00035 278 Gene3D Cytochrome P450 1 268 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1405g00035 278 Pfam Cytochrome P450 9 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1405g00035 278 SUPERFAMILY Cytochrome P450 7 264 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1405g00035 278 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1405g00035 278 PRINTS E-class P450 group I signature 112 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1405g00035 278 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1405g00035 278 PANTHER CYTOCHROME P450 93A3-LIKE 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1405g00035 Vium-Chr1405 301779 307832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1405g00035 1 263 Cytochrome P450 AT5G57260 34.686 2.44e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1405g00035 K20562 - vun:114179959 444.121