Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1404g00008 ATGGCTTCAAATCCCAAAACCTTGACTTTTGAGGAGGTGTCTAAGCACAACCACAAAAAGGATTGCTGGATCATTGTCAATAGAAAGGTGTATGATATCACCCCATTTTTGGATGACCATCCAGGAGGTGATGAAGTTTTGGTGACGTCAACAGCGAAGGACGCCACCATTGATTTTGAAGATGTGGGCCACAGTGATTCTGCCATAGAAATAATGGAAAAATACTATATTGGGAACTTCGACACTTCCACTCTTCCTGCCAACGTTAACCATAGACAGCCACCACCTACACAAGCTCACGGCGGTGGCAATCAATCTTCTGAATTTGTTGTAAAGATCTTGCAATTCCTGTTGCCTTTGCTGATATTGGGCCTTGCCTTTGCTCTGCGGTCGTATGGCAAAGAGAAGCAGGCAGCACCACATGAAAGCTGA 432 0.4491 MASNPKTLTFEEVSKHNHKKDCWIIVNRKVYDITPFLDDHPGGDEVLVTSTAKDATIDFEDVGHSDSAIEIMEKYYIGNFDTSTLPANVNHRQPPPTQAHGGGNQSSEFVVKILQFLLPLLILGLAFALRSYGKEKQAAPHES 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1404g00008 143 FunFam Cytochrome b5 type B 2 85 - -
Vium1404g00008 143 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Vium1404g00008 143 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Vium1404g00008 143 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Vium1404g00008 143 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Vium1404g00008 143 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 79 IPR001199 -
Vium1404g00008 143 SMART Cyt_b5_2 8 81 IPR001199 -
Vium1404g00008 143 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Vium1404g00008 143 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 90 IPR036400 -
Vium1404g00008 143 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Vium1404g00008 143 PANTHER CYTOCHROME B5 4 134 - -
Vium1404g00008 143 Gene3D - 2 84 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1404g00008 Vium-Chr1404 55553 57505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1404g00008 1 135 NADPH P450 reductases AT5G53560 58.519 2.00e-57 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1404g00008 K23490 - gmx:100788796 219.935