Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14047g00001 ATGCAATCAGGCCAATTGACTGAAAAGAGTGATGTTTATAGCTTTGGAGTAGTGCTTGTAGAACTGCTAACTGGGGAGGAGCCTTTCTCTTTTCAAAGGGCAGAAGATAAACGAAGTCTCACATTTCACTTTGTATGTAGCTTGGAAGAGGATCATCTATTTGATGTTCTTCAGATTGGTGTTGAGGATGAAGAAAATAAACACGAGATCATGCAGGTTGCTATTCTTGCTGCCAGGTGCTTGAAACTTAGAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCAATGGAATTGGAGGGAATAAGGCTTATGGACAAACATCCTTGGACCAATACAAGCCAAAATTTTGAGGAGAGACAATACTTGCTTTCTGAGGCACCAAGCATTCGTGAACCTGGTGACAGTAGTGGCCAACAGAATGCTGGATATGATAGCCTGAAGGAACTTCAATTAATTGACTTTGGTGATGGAAGATGA 477 0.4235 MQSGQLTEKSDVYSFGVVLVELLTGEEPFSFQRAEDKRSLTFHFVCSLEEDHLFDVLQIGVEDEENKHEIMQVAILAARCLKLRGEERPSMKEVAMELEGIRLMDKHPWTNTSQNFEERQYLLSEAPSIREPGDSSGQQNAGYDSLKELQLIDFGDGR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14047g00001 158 SUPERFAMILY Protein kinase-like (PK-like) 4 119 IPR011009 -
Vium14047g00001 158 Gene3D Transferase(Phosphotransferase) domain 1 1 125 - -
Vium14047g00001 158 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium14047g00001 158 MobiDBLite consensus disorder prediction 131 145 - -
Vium14047g00001 158 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 111 IPR045274 GO:0007166
Vium14047g00001 158 MobiDBLite consensus disorder prediction 124 158 - -
Vium14047g00001 158 Pfam Protein tyrosine and serine/threonine kinase 2 98 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14047g00001 Vium-Chr14047 164 640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14047g00001 3 158 Receptor kinase-like Gene Family AT1G21240 42.038 7.30e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vium14047g00001 PK_Tyr_Ser-Thr 3.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14047g00001 - - vum:124822288 317.39