Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium139g00001 ATGCACCCTTATTCTGACCCCATTACCAAACCACATGCATCAGAACCACTGCATGCTCATAATAATGATGCAATGGTCAATGCAACTAAACCAGGAGTTGTGGCAAGGCTAATGGGGCTTGATTCACTGCCAAGTACCAAATTCGTATCAAACACAGACACCCCAGATTCAGTTCCCAGAAGTAGGTCAGTCAACTTTGTGGATTACTTGCTCAAGTTCGACACCAGCCAAGCCAACCATCACCAAGTGAAAACCTCAGCATCATTCAGAGAGGTTCCTGCACCGTTTCAGCACAAAAGCAAAAGCCACGATCTTGTCGTGTTCTACTGGGATAGTGGGAGTGAAGATCATGAAGTTGGATCCTTTTCGAGGATTCAAGAAATGGGGTTGGAAGAATCTAGACAGAGAAAGAAGCAGGGAAGCAAGAACAAGGAGATTGTTGGTGTCACAGAAGAGAGGAACCTCACAAAGAGAAGGCAACTTTCCAAGTTCGAGAATGAGCCTAGGGTGGTTCCTCTTAAGCATGGTTCAAAGGTTCGAAATCACAATGAAGATAAAGCTTTGGCACCAGTTTCTGCATGCTCTAGGAGTTGTGGTAATGGAAGAAAAGATGGTAGTGGTGGTGGTCCTAGTGGGTTAAGAACAACCTCAACATTGCCAAATAAGCAGAAGAAAGTGCCCTCTGAAGCAAAACGTTTGAAGAATACCAGAAAACAACACGAGATAGAGAGTGAATGTAGCTCAGAGAATTTCAGTGCAATCTCAGTCCTAGGCGACTATGACTACTCATTTCTTTATGGACCTGATTTTCCAGATTACAGAAGGCACTTAAAGCCAAAGACAAAGTGGGAATTTTCAGAACTTTTATTGGATGATGATGTTGGAGACAGAGCAAGCAAGGACAAAGAATGTTCCTACCCTGACATCAACCAGAAAAAAGAGTGTTTATCAGAATTAAGGGAGAAGCTTTGCAAGTTTACAGAAAATGATTTCAGAGAATCAGATTTCACAAGAAAACGCGTGTGTGAGGGTGAAAATTATGACGAAATTTGTTTGGAGTATGAGCATAAAATTTTTGACATTTTACTACACCAGCTTGTCAATGAACTTGTGGAACTTTCATTTTGA 1128 0.4184 MHPYSDPITKPHASEPLHAHNNDAMVNATKPGVVARLMGLDSLPSTKFVSNTDTPDSVPRSRSVNFVDYLLKFDTSQANHHQVKTSASFREVPAPFQHKSKSHDLVVFYWDSGSEDHEVGSFSRIQEMGLEESRQRKKQGSKNKEIVGVTEERNLTKRRQLSKFENEPRVVPLKHGSKVRNHNEDKALAPVSACSRSCGNGRKDGSGGGPSGLRTTSTLPNKQKKVPSEAKRLKNTRKQHEIESECSSENFSAISVLGDYDYSFLYGPDFPDYRRHLKPKTKWEFSELLLDDDVGDRASKDKECSYPDINQKKECLSELREKLCKFTENDFRESDFTRKRVCEGENYDEICLEYEHKIFDILLHQLVNELVELSF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium139g00001 375 MobiDBLite consensus disorder prediction 177 242 - -
Vium139g00001 375 Pfam DUF761-associated sequence motif 31 47 IPR032795 -
Vium139g00001 375 PANTHER OS05G0128300 PROTEIN 2 373 - -
Vium139g00001 375 MobiDBLite consensus disorder prediction 210 224 - -
Vium139g00001 375 MobiDBLite consensus disorder prediction 225 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium139g00001 Vium-Chr139 51917 53497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium139g00001 32 181 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 34.524 1.39e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium139g00001 - - gmx:100775965 504.597