Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium1395g00001 | ATGCATCCAAAAGCTTCGCTGCGTCTAGCTTTCTTCTTCCTCTTCATCTCCACCATTGCTGCCGCTGCTTGTCGTGCCTCCCCCATCGCTGCTCGCCGCGCCTCCGTGGCGGTGCTCGCCCTGCCTTCGTCATATCGAAACTCGGACTCATGCAGAGGCAAAACCCGATCATTCCTACGCGGAATCGACGTTAATCGGTTACCTTCGGCCGTGGACATGAAAGAGGAAGCGAGAGTTTCGTCTCCGAACAACACCGTTTCGAGCGTGAGCGGAAAGCGAAGCGAGCGAGAACCCAACAGCAAAGAACACGACATGAATAGTGCCTGTTCCCGCGGAATCAACGACGAAGAAGACCGCGAAACCTCAAGGAAAAAACTCAGACTCTCCAAAGACCAATCAGTTATTTTGGAAGAAAGTTTCAAAGAGCACAATACCCTCAACCAT | 444 | 0.5248 | MHPKASLRLAFFFLFISTIAAAACRASPIAARRASVAVLALPSSYRNSDSCRGKTRSFLRGIDVNRLPSAVDMKEEARVSSPNNTVSSVSGKRSEREPNSKEHDMNSACSRGINDEEDRETSRKKLRLSKDQSVILEESFKEHNTLNH | 148 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium1395g00001 | 148 | MobiDBLite | consensus disorder prediction | 72 | 128 | - | - | |
| Vium1395g00001 | 148 | MobiDBLite | consensus disorder prediction | 94 | 128 | - | - | |
| Vium1395g00001 | 148 | MobiDBLite | consensus disorder prediction | 78 | 93 | - | - | |
| Vium1395g00001 | 148 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | - | - | |
| Vium1395g00001 | 148 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 56 | 148 | - | - | |
| Vium1395g00001 | 148 | Pfam | HD-ZIP protein N terminus | 40 | 97 | IPR006712 | GO:0005634 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vium1395g00001 | Vium-Chr1395 | 11007 | 11932 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vium1395g00001 | 54 | 147 | Homeobox Transcription Factor Family | AT4G17460 | 55.140 | 8.77e-27 | 99.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vium1395g00001 | K09338 | - | vum:124826198 | 266.929 |