Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1385g00032 ATGGTAACTACATCATTCTTTGCAACTAACGAGTCAACTGACTGGAGATTGACACAGTCTGAAACGATTGCTGTTATTTATGCGGGATTTATCGCATCTGCCCTTAATTATGGACTGATTACATGGTGCAACAAGATCTTGGGGCCAGCCATGGTTGCTCTTTATAACCCACTTCAACCAGGAGCTTCGGCTCTCCTGTCCAGAATTTTTCTAGGAACTCCAATTTACATGGGAAGCGTCGTAGGGGGATCTATGATCATTATTGGTTTGTATGCGGTTACTTGGGCGTCTTACAGAGAAAGACACGCAGCTGCTGCAGTTATTTCTCATGATAAGAATTCTTATAGAATTAACATTTTTTCAGGCCCCTCCACCATGTCCCCTAAGCCTTCAGATTAA 399 0.4286 MVTTSFFATNESTDWRLTQSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGTPIYMGSVVGGSMIIIGLYAVTWASYRERHAAAAVISHDKNSYRINIFSGPSTMSPKPSD 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1385g00032 132 SUPERFAMILY Multidrug resistance efflux transporter EmrE 14 100 - -
Vium1385g00032 132 PANTHER WAT1-RELATED PROTEIN 4 101 IPR030184 GO:0016020|GO:0022857
Vium1385g00032 132 Pfam EamA-like transporter family 13 94 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1385g00032 Vium-Chr1385 245713 248911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1385g00032 1 106 Nodulin-like Gene Family AT5G45370 66.038 7.14e-46 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1385g00032 - - vum:124826160 259.996