Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1385g00031 ATGAACGGAGTTAACTTTCATGTGATGTGGCAAACAGCGAGAACACTCTTATGCCAGCTTCCATCTTCACTCTCTGACACGTTGTTGGGGGCAAAGAAAGTTGAGGAGGTACATCTGAAGGTCGTCTTCTTGAGGAGGATTGGGGATATAGGGTTTGGTGCTGCGGAATCAGTCTCGGAAAATTCCATCCATGAATTCTCGGTCAAGGGAAGTGGCAGTAGCGGTGGCACTGCTCCGTCGTCTGCGCCGGTGAAGCAATATTTGCAGGAGTTCTCTAAGCTGTTTCAGTACTATCTCGACAAATCTACCCCCCATTCCGCCTACAGATGGATTGGGACATTGGTTCTGTTATATGTGAAAAATGTGTTAATTATTGTTGTGAAATATTTCCAGGCTCCACTATTAAAAAAGTATCCTGCAAACCTGTCTGTCACGGCATATTCATACTTCTTTGGAGCTGTTCTGATGGTAACTACATCATTCTTTGCAACTAACGAGTCAACTGACTGGAGATTGACACAGTCTGAAACGATTGCTGTTATTTATGCGGGATTTATCGCATCTGCCCTTAATTATGGACTGATTACATGGTGCAACAAGATCTTGGGGCCAGCCATGGTTGCTCTTTATAACCCACTTCAACCAGGAGCTTCGGCTCTCCTGTCCAGAATTTTTCTAGGAACTCCAATTTACATGGGAAGCGTCGTAGGGGGATCTATGATCATTATTGGTTTGTATGCGGTTACTTGGGCGTCTTACAGAGAAAGACACGCAGCTGCTGCAGTTATTTCTCATGATAAGAATTCTTATAGAATTAACATTTTTTCAGGCCCCTCCACCATGTCCCCTAAGCCTTCAGATTAA 864 0.4421 MNGVNFHVMWQTARTLLCQLPSSLSDTLLGAKKVEEVHLKVVFLRRIGDIGFGAAESVSENSIHEFSVKGSGSSGGTAPSSAPVKQYLQEFSKLFQYYLDKSTPHSAYRWIGTLVLLYVKNVLIIVVKYFQAPLLKKYPANLSVTAYSYFFGAVLMVTTSFFATNESTDWRLTQSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGTPIYMGSVVGGSMIIIGLYAVTWASYRERHAAAAVISHDKNSYRINIFSGPSTMSPKPSD 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1385g00031 287 Pfam EamA-like transporter family 134 249 IPR000620 GO:0016020
Vium1385g00031 287 SUPERFAMILY Multidrug resistance efflux transporter EmrE 168 255 - -
Vium1385g00031 287 PANTHER WAT1-RELATED PROTEIN 102 256 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1385g00031 Vium-Chr1385 238954 244548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1385g00031 131 261 Nodulin-like Gene Family AT5G45370 68.702 6.23e-59 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1385g00031 - - vum:124826160 556.599