Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1385g00029 ATGGTCTTTGCCAAACTCCAGGGCGCCAAGAACAACCTTCGAATCTCTTCCTCCCTTCAGGATCTATCTTCCTACCGGAACATCGACCCCGAACATGGCCTTCTCCGAGACCCCATCAACGCAAGTTTCTCCAAGACCAAACCGCTCCAGCTCCCCAACCCGGGTCGCCGCAAATGCCTCGTCCCGATCGCGATCATTGCCTTCCTCCTCCTCATCCTTTTCCTTCTCTACAACTTCTACTCCCACCAAGCCTCCCCCAAATACTACGTCGTTCTCGACTGCGGCAGCACCGGGACACGTGTCTACGTCTACAAGGCCCAAGTCCAACAAGCGCACTCCAACAACTTCCCCATCGCCATCCAATCCCTAAAAGACGGCCTCCGGAAGAACCCCGCCAGTGGCCGCGCCTACGACCGGATGGAGACCGAACCGGGCCTTGATAAACTCGTCCACAACGTAACCGGTTTGAAAACCGCGCTCAAACCGCTTCTAAAATGGGCGCAGAAGCAGATTCCAGAAGCTTCCCACAGGTCCACTTCCTTGTTCCTCTACGCCACCGCCGGGGTCCGGAGACTCCCCTTCGATGACTCCAAGTGGCTGCTCGATAATGCGTGGAACGTGCTTAAAGGTTCGCCTTTTGTGTGTCGGAGGGCTTGGGTGAAGATCATTTCCGGCACTGAGGAAGCTTACTTTGGCTGGATTGCGCTTAATTATGACAGTGGCAATCTCGGGGTTGAGCCCCGTAAGGAAACCTACGGTGCTCTTGATTTGGGCGGTTCTTCTCTGCAGGTGACTTTTGAGGGTTATAATCAACAGCATTTCAATAGTGAGACTAGTTTGTATGTTAGGATTGGGTCTGTAAACCATCATTTGACTGCTTATTCTCTTGCTGGTTACGGCCTCAATGAGGCCTTTGATAAGTCTGTTGCGCGTGTTTTCAAGAAGTTTGGGTATAGTGTAGCGGATGTTTTGAAGGGGAATCTGGAGGTTAAGCATCCGTGCTTGCAGTCTGGATACAAGGAGCGCTACACGTGCTCGCATTGTGCTGCTTTGGAGAAAGGAGGGGAGAGTCCTAAGGTTGAGGGGAATGAGAATTTGTTAGGGAAGAAGGAAGGATCGAAGACCGCGGTGACTCTTGTTGGCGTGCCGAATTGGCAGGAGTGTAGCGCGCTGGCGAAGGTTGCTGTGAATTTGTCTGAATGGAGTGATGTTAGTCCTGGGCTGGATTGTGAGATTGAACCCTGTGCTCTTGGTGATAACTTGCCCCGCCCTACGGGACACTTTTATGTGATTTCTGGATTTTTTGTGGTGTATAGATTTTTCAACTTGAGTGCAGAGGCCACGCTTGAGGATGTGTTGGAGAAGGGTAGGGAATTCTGTGAGAAGAGATGGGATGTTGCAAAGAATAGTGTTGCTCCTCAGCCCTTTATTGAGCAGTACTGCTTTCGGGCACCGTATATTGCATCATTGCTTAGAGAGGGTTTGCACATTACTGATAAGAGTATAACTGTTGGTTCTGGAAGTATCACTTGGACACTTGGAGTGGCTTTGTTGGAAGCTGGGAAGGCGTATTCTGTTAGATTTGGCCTTCGTAGTTTAGGCTTGCTTCAGATGAAGATGAATATACCTTTTCTTGTTCCCATTTTGATACTTTCGTTTATTCTTCTGCTTTGTGCTTTATCGTGGGTTGTCAATTGGATGCCAAGATTTTTCCGGAGACAATATCTTCCATTTTTCAGGCATAACAGTGGGTCCAGTGCATCTGTCCTTAATATCCCATCTACATTTCGGTTTCCGCGGTGGAGTCCAATCAATTCTGGGGATAGAATAAAGATCCCACTCAGCCCAAGAGCCGCAGGTTCACAGGGTAGATCGTTTAGCCTGGGACAGGGTCTTGGTGATAACAGTGGCAACATCCAGCTGATGGAGTCTCCCTTTCATCCATCAGCTGGTAGTTTCGTGCATAGTTATTCTTCAAACAATTTAGGGCAGCTGCAGGTTGACAGCAGTAGTATAGGGGCATTCTGGTCATCCCACAGAAGTCAGATGCGTCTGCAAAGTAGGAGATCTCAATCTCGAGAAGACCTGCATTCTTCATTGGCTGAGACGCATATGGTGAAGGTTTAG 2127 0.4946 MVFAKLQGAKNNLRISSSLQDLSSYRNIDPEHGLLRDPINASFSKTKPLQLPNPGRRKCLVPIAIIAFLLLILFLLYNFYSHQASPKYYVVLDCGSTGTRVYVYKAQVQQAHSNNFPIAIQSLKDGLRKNPASGRAYDRMETEPGLDKLVHNVTGLKTALKPLLKWAQKQIPEASHRSTSLFLYATAGVRRLPFDDSKWLLDNAWNVLKGSPFVCRRAWVKIISGTEEAYFGWIALNYDSGNLGVEPRKETYGALDLGGSSLQVTFEGYNQQHFNSETSLYVRIGSVNHHLTAYSLAGYGLNEAFDKSVARVFKKFGYSVADVLKGNLEVKHPCLQSGYKERYTCSHCAALEKGGESPKVEGNENLLGKKEGSKTAVTLVGVPNWQECSALAKVAVNLSEWSDVSPGLDCEIEPCALGDNLPRPTGHFYVISGFFVVYRFFNLSAEATLEDVLEKGREFCEKRWDVAKNSVAPQPFIEQYCFRAPYIASLLREGLHITDKSITVGSGSITWTLGVALLEAGKAYSVRFGLRSLGLLQMKMNIPFLVPILILSFILLLCALSWVVNWMPRFFRRQYLPFFRHNSGSSASVLNIPSTFRFPRWSPINSGDRIKIPLSPRAAGSQGRSFSLGQGLGDNSGNIQLMESPFHPSAGSFVHSYSSNNLGQLQVDSSSIGAFWSSHRSQMRLQSRRSQSREDLHSSLAETHMVKV 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1385g00029 708 MobiDBLite consensus disorder prediction 686 708 - -
Vium1385g00029 708 Gene3D - 77 224 - -
Vium1385g00029 708 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 63 522 IPR000407 GO:0016787
Vium1385g00029 708 Gene3D Exopolyphosphatase. Domain 2 225 506 - -
Vium1385g00029 708 MobiDBLite consensus disorder prediction 687 708 - -
Vium1385g00029 708 Pfam GDA1/CD39 (nucleoside phosphatase) family 84 518 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1385g00029 Vium-Chr1385 227286 233993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1385g00029 8 708 Nodulin-like Gene Family AT4G19180 59.527 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1385g00029 - - gmx:100809597 1104.74