Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1385g00022 ATGTCTTCTTCTGGTTATGCCACAAGCAGTGCTTTGTTTTTCCTGTTTCTGGCTGTGCTTGTTGCGAAAGTTAGCTTTTGCTTCTCTACCAAGGTTTATGTAGTGTACATGGGAAGCAAAACTGGGGAACACCCAGATGACGTTCTTAGGGAAAATCATCAAATTCTTGCTGCTGTTCACAGTGGAAGCATTGAACAAGCCCGAGTCTCTCATGTTTACAGCTACAAACATGCTTTCAGAGGCTTTGCAGCCAAACTCAGTGATGAACAGGCTTCCCAAATTTCAAAAATGCCAGGAGTGGTTTCTGTTTTTCCCAATTCTAAAAGAAAGCTGCACACAACTCATTCCTGGGATTTCATGGGACTTCTGGATGATCAAACCATGGAGACTCTTGGTTACTCCATCAGAAACCAAGCAAATATCATCATTGGTTTCATAGATACTGGAATTTGGCCTGAGTCCCCTAGCTTCAGTGACACCGACATGCCTGCAGTGCCACCAGGCTGGAAGGGCAAATGCCAATCAGGGGAAGCATTCAATGCCTCATCTTGCAACAGGAAAGTGATAGGAGCCAGATACTACAGGATTGGATACGAAGCTGAGGAAGAGTCAGATGCGAAAATCTCCTACAGATCTGCAAGGGATAGCACTGGTCATGGGAGCCATACAGCCTCCATAGCAGCAGGGAGGTATGTGGCAAACATGAACTACAAGGGATTGGCAGCTGGAGGAGCAAGAGGAGGTGCACCAATGGCCAGAATTGCTGTGTACAAGACATGTTGGGATTCTGGTTGTTATGATGTGGACTTGCTAGCTGCCTTCGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTTTCACTGGGTGCTGAATCACCTCAAGGAGACTATTTCAGTGATGCCATTTCTGTGGGGTCATTCCATGCGGCTAGTCGTGGGGTGCTGGTTGTCGCATCAGCTGGAAATGAAGGGAGTGCTGCTTCTGCCACAAACCTTGCTCCATGGATTCTCACCGTTGCTGCCAGCTCAACTGATAGGGATTTCACTTCTGATATCATATTGGGGAATGGTGCCAAAATCATGGGTGAAAGTCTCAGTCTCTTTGAAATGAATGCCTCCACAAGGATAATTTCTGCTTCTGCAGCCAATGGAGGATACTTCACTTCTTATCAATCCAGTTACTGTTTGGAAAGTTCTTTGAATAAAACAAAGAGCAAGGGCAAGGTTCTGGTGTGTAGACATGCAGAGAGTTCAACGGAGTCAAAGGTGCAAAAGAGCAAGATAGTTAAAGATGCTGGTGGAGTTGGCATGATACTTATTGATGAGAGAGATCAAGATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTGTTGGAAAGAAGATAGGAGGACAGATTCTATCCTACCTCAAAACTACACGTAAGCCTGTGTCAAGGATATTTGGTGCAAAGACTGTTCTAGGAGCTCATCCTGCCCCAAGTGTAGCAGCTTTTTCCTCTAAAGGTCCCAATTCTTTAAACCCTGAAATTCTGAAGCCTGATGTCACAGCTCCAGGTCTAAATATCCTTGCAGCTTGGTCTCCAGCAGCTGGAAACATGTTCAACATTCTCTCAGGAACTTCCATGGCATGTCCTCATATAACAGGAATCGCAACCTTAGTCAAAGCTGTCCATCCTTCATGGTCTCCATCTGCTATCAAATCTGCCATCATGACAACTGCTACAATACTGGATAAGCACCACAGACCCATCACTGCAGATCCAGAGCAAAGAAGGGCTAATGCATTTGACTACGGATCAGGGTTTGTAAACCCTGCTAGAGTTCTTGATCCTGGTCTCATCTATGACTCAGAGCCTGCAGATTATGTTGCATTCCTGTGTTCAATAGGTTATGATGAGAGGTCACTCCATCAAGTTACAAGAGACAACAGCACCTGTGATAGGGCATTCAACACAGCATCTGACCTGAACTACCCATCTATTTCAGTGCCAAATCTTAAAGATAACTTTTCTGTTACTAGGATTGTGACTAATGTTGGGAAAGCAAGAAGTGTTTATAAAGCTATAGTGTCTTCTCCACCTGGTGTTAGAGTCAGTGTTATACCTAACCAGTTAATTTTTACAAGAATTGGGCAAAAAATGAATTTCACTCTGAAGTTCAAAATAACTGCTCCCTCAAAGGGATATAAATTTGGGTTCTTGTCATGGAGGAATGGGAGGTCACAAGTCACTAGTCCTTTGGTTGTCCAGGTTGCACCTGGAATAAAATAG 2274 0.4437 MSSSGYATSSALFFLFLAVLVAKVSFCFSTKVYVVYMGSKTGEHPDDVLRENHQILAAVHSGSIEQARVSHVYSYKHAFRGFAAKLSDEQASQISKMPGVVSVFPNSKRKLHTTHSWDFMGLLDDQTMETLGYSIRNQANIIIGFIDTGIWPESPSFSDTDMPAVPPGWKGKCQSGEAFNASSCNRKVIGARYYRIGYEAEEESDAKISYRSARDSTGHGSHTASIAAGRYVANMNYKGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAESPQGDYFSDAISVGSFHAASRGVLVVASAGNEGSAASATNLAPWILTVAASSTDRDFTSDIILGNGAKIMGESLSLFEMNASTRIISASAANGGYFTSYQSSYCLESSLNKTKSKGKVLVCRHAESSTESKVQKSKIVKDAGGVGMILIDERDQDVAIPFVIPSAIVGKKIGGQILSYLKTTRKPVSRIFGAKTVLGAHPAPSVAAFSSKGPNSLNPEILKPDVTAPGLNILAAWSPAAGNMFNILSGTSMACPHITGIATLVKAVHPSWSPSAIKSAIMTTATILDKHHRPITADPEQRRANAFDYGSGFVNPARVLDPGLIYDSEPADYVAFLCSIGYDERSLHQVTRDNSTCDRAFNTASDLNYPSISVPNLKDNFSVTRIVTNVGKARSVYKAIVSSPPGVRVSVIPNQLIFTRIGQKMNFTLKFKITAPSKGYKFGFLSWRNGRSQVTSPLVVQVAPGIK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1385g00022 757 Gene3D - 346 488 - -
Vium1385g00022 757 ProSiteProfiles Serine proteases, subtilase domain profile. 116 610 - -
Vium1385g00022 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 750 IPR045051 -
Vium1385g00022 757 Pfam PA domain 396 464 IPR003137 -
Vium1385g00022 757 Pfam Fibronectin type-III domain 656 750 IPR041469 -
Vium1385g00022 757 FunFam Subtilisin-like protease SBT5.3 22 112 - -
Vium1385g00022 757 Pfam Subtilase family 140 578 IPR000209 GO:0006508|GO:0008236
Vium1385g00022 757 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Vium1385g00022 757 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Vium1385g00022 757 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Vium1385g00022 757 CDD Peptidases_S8_3 110 576 IPR034197 -
Vium1385g00022 757 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Vium1385g00022 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 112 IPR037045 -
Vium1385g00022 757 SUPERFAMILY Subtilisin-like 111 614 IPR036852 GO:0004252|GO:0006508
Vium1385g00022 757 FunFam subtilisin-like protease SBT1.5 346 488 - -
Vium1385g00022 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Vium1385g00022 757 FunFam Subtilisin-like protease SBT1.5 140 355 - -
Vium1385g00022 757 CDD PA_subtilisin_like 352 481 - -
Vium1385g00022 757 FunFam Subtilisin-like protease SBT1.5 627 753 - -
Vium1385g00022 757 Gene3D Peptidase S8/S53 domain 140 623 IPR036852 GO:0004252|GO:0006508
Vium1385g00022 757 Gene3D - 627 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1385g00022 Vium-Chr1385 147585 153256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1385g00022 8 751 Subtilisin-like Serine Gene Family AT4G10520 41.821 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1385g00022 - - gmx:100808547 1370.14