Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1381g00001 ATGGTTTTAATCATGGCAACGGTGACATACCCTCCACCGCCACCTTTTTACAGGCTTTACAAAGATTACTTGCAAGACCCTAAGTCTGCTCCCGAGCCTCCACCTACTCTACCTCCACCGCCTATTGAAGGGAACTACGTTTGTTTTGGAGGCAATTACACGGTAACCTATGATGTTCTAACAAGCTTGGAAGAACAAGGGGTTGCGCCAGCTTATTCTAGGGGCCTAATGTTGGTTAGGCCATTTTTATCCCTATTCATGCACAATTTGATATGA 276 0.4529 MVLIMATVTYPPPPPFYRLYKDYLQDPKSAPEPPPTLPPPPIEGNYVCFGGNYTVTYDVLTSLEEQGVAPAYSRGLMLVRPFLSLFMHNLI 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1381g00001 91 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 6 73 IPR009244 GO:0003712|GO:0006357|GO:0016592
Vium1381g00001 91 Pfam MED7 protein 9 72 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Vium1381g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1381g00001 K15148 - cave:132192188 99.3673