Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13801g00004 ATGGGTTTCCTGGTGACGACGCTGATCTTCGCAGTGATCGGAATCATCGCGAGCCTCTGCACCAGAATTTGCTGCAACAGAGGACCTTCTACCAATCTATTTCACCTAACTTTGGTAATTACTGCAACAATTTGCTGCTGGATGATGTGGGCGATTGTATATCTGGCACAGATGAAACCACTCATTGTACCTATACTGAGTGAGGGCGAATGA 213 0.4648 MGFLVTTLIFAVIGIIASLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKPLIVPILSEGE 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13801g00004 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 68 IPR008389 GO:0033179|GO:0046961|GO:1902600
Vium13801g00004 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13801g00004 Vium-Chr13801 12895 15614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13801g00004 1 70 Primary Pumps ATPases(2) AT5G55290 87.143 1.44e-41 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13801g00004 K02153 - qsu:112038065 144.436