Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13770g00001 CCTTCTTCTGCCCCTCAACCTAGTACGAGTGGTTCTTCACCAACACCAAGCACTATGTTATCCCCAGCTCCAGGCCCATCCACTGGACCAGTTACTTTCACTGTTGGAGAGAGCTTAGGCTGGACTGTTCCCACTAACGGTGCTGCAGCTTACACATCTTGGGCATCTGGCAAGACTTTCAAGGCTGGAGACATACTAGTGTTCAACTACCGATCCAATACTCACAACGTAGAGGAAGTGAGAAAAGAGAATTTTGACTTTTGCAACTCAACCTCTCCTCTTGCCACTTACACCACAACACCCGTGAGAGTGACCTTGAACAGATCTGGTGCTCACTTCTTCATCTGTGGAGTTCTAGGGCACTGTCAAGGAGGTCAAAAACTCGCCATCAATGTCACCGACAACAATAGTAGTGCCACCTCGTCTTCCCCTGTCGCTACCCCTCCTCCAGCCGCCACCGCTCCTCCCCCCCCTTCTCCCTCAAGCTCTCTCATCCCTCTCCCACAGAACTCTGAAGCTGCATCTGTCGGACTTGTTGGAGGTTCTGCCACCCTTCTTTCACTTCTCTTGGCTTTCTTCTGTTAG 585 0.5128 PSSAPQPSTSGSSPTPSTMLSPAPGPSTGPVTFTVGESLGWTVPTNGAAAYTSWASGKTFKAGDILVFNYRSNTHNVEEVRKENFDFCNSTSPLATYTTTPVRVTLNRSGAHFFICGVLGHCQGGQKLAINVTDNNSSATSSSPVATPPPAATAPPPPSPSSSLIPLPQNSEAASVGLVGGSATLLSLLLAFFC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13770g00001 194 PANTHER BLUE COPPER PROTEIN 32 142 IPR039391 GO:0009055
Vium13770g00001 194 MobiDBLite consensus disorder prediction 148 164 - -
Vium13770g00001 194 MobiDBLite consensus disorder prediction 1 29 - -
Vium13770g00001 194 MobiDBLite consensus disorder prediction 134 167 - -
Vium13770g00001 194 SUPERFAMILY Cupredoxins 31 133 IPR008972 -
Vium13770g00001 194 Gene3D - 31 146 IPR008972 -
Vium13770g00001 194 CDD Phytocyanin 31 132 - -
Vium13770g00001 194 Pfam Plastocyanin-like domain 41 126 IPR003245 GO:0009055
Vium13770g00001 194 ProSiteProfiles Phytocyanin domain profile. 31 134 IPR003245 GO:0009055
Vium13770g00001 194 FunFam Blue copper 30 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13770g00001 Vium-Chr13770 6 761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13770g00001 36 164 Phytocyanin Superfamily AT2G25060 42.748 2.72e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13770g00001 - - vum:124822172 282.722