Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13758g00004 ATGAAGGAAAACAAATCATCAGCACCTAAAATGCTGAACAGGAACTGGGTTTTAAAGCGTAAGCGGAGAAAGCTTCCTTTTGGACTAGATCAGTCCTCTGGTAAAGACCAGTCCAATAGTAAAGAGGAAAATTCACTAACATCTGAATCTTCTAGAAATGCTTCAGCTAAACGTGCGCTAAAGACTGAAGTACCTACTGATCAAATGTCATCTAAGAAGAAAGGAAATGATGGGTATTACTATGAATGCGTGATCTGTGATGTTGGTGGCAACTTATTGTGCTGTGATAGCTGTCCTCGCACATATCATTTACAGTGTCTTGATCCCCCTCTTAAGCGCATTCCTAATGGGAAGTGGCAATGTCCAAGTTGCTTTGAAGAAAAGGATCAACTAAAGCCCATAAACCACCTGGATCCAATTTCAAAACGAGCAAGGACAAAGACTGTCCCTACAAAATCAAAAGGCCAAATCAACTCACTTAACCTTGAAAAAGTATCTGGACTTTTTGGAAGCAAACTTATTTCAAAGAAAAGGTCCTCAAGCAAAGGGAAATCTATTTCAACTGTGGGAGTCAAATTTTTTGGAAAGAAATTGTTGTCTTCCTCAGTTGATGAAACTGGTAGTGACAAACCTATTGACCCGTCTCTTGGGAGTCCTATGGAAGGAACTTCGTCATGTGTGGATGCTGATGAAAAGAAATCCAGCTTGTCCCCAACAGACTCCCCTGTAGACAGGAAGTCAACTTCACCAGCCAAGGTAGTTTTAACGCTCTCTAAAATTACTGATTTAGAAGCAAATGATGAACAACTAGAGGGTAAGACTTCTTCACCTTGCAATAAGGTTCCTTTAAGGAAAACACTTGTTCTTGCTATTGCTGCTAGCGGAGAGGACGTGAGAAAAAGGAAAAATAAAGTTGTTAACGATAATACTAGTCAAAAAAAGCAAAAGACTGAAAAGGGCAAAAAAATTGTCAATCCTTCTTCTACAAAGTCCAAGTCTGGGAATAATAAAGTACACAAGAAGCAGAAGTCTATAACCCATAGCATTTCTGCATCTATACCAAAAGAGGATGTTGGAAACAAGAATTCTCAAGTCCAGCAGAAAGATGAGAAGTTTCTTCGGGTAATGAAAGACACATCAAATGAACTGGATAAAGCACAAAATTGTGTAGATGAAACTTTGATGCATGAAAATAGTACCGCCGTTGTTGAGTCTCTGCAGGTTGATCGGGTTTTAGGGTGTCGAATTCATGGTGAGAATACAAATTCATTAAATAATTTGTCTTTGAATATTGAGGGTGGCTCGCCTTCTGGTGATCTGGTCATATCCGAAAATCAGACCAGGCTTTTAGAGGATAATTCTACTTGTGCTAATGATTTGGATGCAGAATCAACTGAAGATCATGTTGATGATCGTCAAAATGTCGTCAAGATTTCTGATGAAGAAGGAATGTTGATAAACACTAATAGAGTGGAAACAATTCATGTATACAGAAGATCAGTAACGAAAGAAAGTAAGAAAGGAAATCCTATCGATTCATTGAGTAAAGCCACTGATGATTTAGGTTCCTGTGCCAGGGATGGTATAGATCAAGATGATTCTGCTGTATCTGCTGAACAGTTGAAAAAACCAAATGACAAGCTTGAGATAGAGGAGAGCATTAATGTTGCTTTAGGAAGCAAGGATAACAGCGAGCTTCCAAAAAATTGTGAAACACATGTCTCTATTGAAACAGAACAAAAGGAAATGAATGTGGAGAAGGCGATGACTGGCAATATTGATGAAAAAGCTCAGGATGCTAATGCAATTGATTGTGCTGGTCCAAATGGAGAGGAGGTTTTCTATGAATTTTTAGTTAAATGGGTAGGAAAGTCTCATATTCATAATAGTTGGATTTCTGAATCCCAGTTAAAAGTTCTTGCAAAGAGAAAACTAGAAAATTATAAGGCAAAGTATGGGATGTCAATAATTAATATTTGTGAGGAGCGCTGGAAGCAGCCTCAGCGGGTGCTAGCCCTTCAAACTTCCAAACATGGAACATCTGAAGGATTTGTAAAGTGGAGTGGACTGCCTTATGATGAATGCACTTGGGAAAGTTTAGATGAACCAGTGCTTCAAAATTCTTCTCATTTGATTACACTTTTTAATAAGCTTGAAACTCTCACGTTGGAAAAGGATTCCTCAAAGGAAAATTCAACTAGGAGAAACAATGACCATCAAAATGATATTTTCAATCTTACAGAGCAACCTAAGGATTTGAAAGGTGGTTCTTTGTTTCCTCATCAGCTTGAGGCGCTGAACTGGTTGCGCAAATGCTGGTATAAGTCCAAAAATGTGATACTTGCTGATGAGATGGGACTTGGGAAAACAGTATCTGCTTGTGCTTTTATTTCATCGTTGTATTTTGAATTCAAAGTTTCACTTCCTTGCTTGGTCTTGGTACCACTTTCTACAATGCCTAATTGGCTTGCTGAATTTTCACTGTGGGCTCCAGATGTGAACGTTGTTGAATATCATGGCTGTGCTAAGGCTAGAGCCATAATTCGCCAGTATGAATGGCATGCTAATGATCCAAGTGGATTGAGTAAGAAAACTGAAGCCTATAAATTCAATGTGCTTTTAACTACATATGAAATGGTTCTTGCTGATTATTCCCATTTACGTGGAGTTCCTTGGGAAGTTCTTGTTGTTGATGAGGGCCATCGACTGAAGAATTCTGGAAGTAAGCTTTTCAGTTTGCTAAATACATTCTCTTTCCAACACCGTGTACTGTTGACAGGTACCCCTCTCCAGAACAACCTCGGCGAGATGTACAACTTGCTCAACTTCTTGCAGCCAGCTTCATTTCCTTCTCTATCTTCTTTTGAGGAGAAATTTAATGATCTTACGACTGCAGAGAAAGTTGATGAATTGAAAAAACTTGTTGCTCCTCACATGCTTCGTAGACTTAAAAAGGATGCCATGCAAAATATCCCTCCCAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAAGCTGAATATTATCGTGCAATGCTTACAAAGAATTATCAGATATTGCGGAATATTGGAAAAGGGGTTGCCCAACAGTCTATGCTGAACATTGTGATGCAATTGAGGAAGGTCTGTAATCATCCATACCTCATACCAGGAACCGAGCCTGAATCTGGTTCTGTCGAGTTCCTTCATGAAATGAGAATAAAGGCTTCAGCTAAGTTGACTCTTCTACATTCTATGCTAAAGATTTTACACAAGGAAGGTCACAGAGTTCTTATTTTCTCTCAAATGACCAAGCTTCTTGACATTCTGGAGGATTATTTGACTATAGAGTTTGGGCCTAAAACATATGAGAGGGTAGATGGATCTGTTTCTGTAGCTGATCGCCAGACAGCAATTTCACGCTTTAACCAAGACAAAAGTCGATTTGTTTTCTTGTTATCCACTCGCTCTTGTGGACTTGGAATAAATTTGGCAACTGCTGACACTGTCATCATCTATGATTCTGATTTCAACCCCCATGCAGATATCCAAGCAATGAATCGAGCACACAGAATTGGACAATCTAATAGGCTTTTGGTATACCGGCTTGTGGTTCGTGCTAGTGTTGAAGAGCGCATCTTGCAGCTTGCTAAGAAGAAATTGATGCTTGACCAGCTTTTTGTAAATAAGTCTGGATCACAAAAAGAAGTAGAAGATATTTTAAAGTGGGGAACTGAGGAACTCTTCAACGATTCTCCAGGACTGAATGGGAAAGACATGAGTGAAAACAACAATAGTAGCAAAGATGAGCCTGTAGCAGATGTAGAACATAAGCATAGGAAGAGGACTGGTGGTCTGGGAGATGTATACAAGGATAAGTGTACTGATAGCAACAGCAAGATTTTGTGGGATGAAAATGCTATTTTAAAATTGCTTGATCGTTCAAATCTTCAAGATGGTTCAACTGATAATGCTGAAGGGGATTCTGAGAATGATATGCTGGGTTCAGTGAAGGCCCTTGAGTGGAATGATGAACCAACTGAAGAGCATGTAGTGGGTGAATCTCCTCCTGATGGGACTGATGACATGTGTCCACAAAATTCTGAGAAGAGAGAGGATAACACAGTGAATGTCAATGAAGAAAATGAATGGGACAAACTACTGCGTGTGAGGTGGGAGAAATATCAAAATGAAGAGGAAGCAGCTCTTGGTCGAGGGAAGCGGCAGAGGAAAGCTGTTTCTTATAGGGAAGTATATGCTCCACATCCAAGTGAAACAATGAGTGAGAGTGGCGGTGAAGAGGAAAAAGAGCCAGAACCAGAGCCTGAGCGTGAATATACACCAGCAGGACGGGCCCATAAGACAAAATATGTTAAACTCCGATCTCGGCAAAAGGAAGTACTTGCCCGAAGGAAGGCGATTAAAGAAGCAAATCCTGAGGGTCTTCTAAGTAATGAGTTACTCTCACATTCTCCAGCCATTGCCAAAGGTGGGGATCTAGCGGCTGGACCAACACACTCAGTTCAAGAGTTGACTTCTATAAACTTAGAGGACAGCAAATACACACAACTTTCAGAAGCTCAGAATAGCAACACGGACTCTTTATCAAGGATTGACAAGCTTTCCAAACATAAAATGAGCAGTTACTTTGATGCTTCTGTCAGTAACCTAGGCCGTTCTCTCCCTGATATTTTTCTTCCAAGTCATCCTAAGGGGGGGCTGAGCATGACGAACAATATGTCCACCAACAATTTATTGCCCGTACTAGGGCTTTGTGCTCCCAATGCAAAACAAATAGAGTCATCAGAAACCAATACTTCAAAGTTAAATTGGAGACAAAATAGACATGGATCCAGACAAGAGTTTCCATTTAGTCTTGCATCAATGGATGCTGACGTGAGAAGTAAGGAAGTGGCAGCAAATACCAAGCTGGCAGATACATCTACAGAAAATTTACACCCAAGTTTCAAACATACCATCCCTGATAACAGTCTCCCATTTGTTCCATTTCCACCCTCTGTGCAAGGAAAGGAATCTGATGCATTTGAGAATTCAGGTGCTAGATTCTCTCATTTTCAGGAGAAGGTGGCATTGACAAACCTGCCATTTGATGAAAGGTTGCTGGCCAGGTTTCCACTTACAACCAAGAGCATACCAAATTCACATCTGGACCTTTTGCCTAATTTGTCTATAGGAGGAAGACTTGAATCTTTGAATGGATCTATGCAAGACCTTCCGACAATGCCTGCATTGCCTAATTTCAAAATACCCCCTGAAGATTTATTCAGATATAATCAGCAAGACAGGGATGTACCCCCTACTTTGGGTTTGGGGCAAAGGTCAAGCACGTTCTCATCTTTCCCAGAGAACCATAGAAAGGTGCTTGAAAACATAATGATGAGAACCGGATCTGGATCAAGTAATTTATTGAAAAAGAAGTCAAAATCCGATGGGTGGTCTGAAGATGAGCTTGATTCCCTGTGGATTGGTGTTCGTAGGCACGGAAGAGGTAATTGGGATGCCATGATCCGAGATCCCAAGTTAAAGTTTTCAAAGTATAAAACATCCGAGGATTTATCCGTGAGGTGGGAAGAGGAACAGGTAAAGGTCTTTCAGGGGCCTCCTTTTCCTACGCAAAGATCCTCCAAGATGACAAAGTCTACCAAATCAGCACATTTTCCAATCTCTGATGGCATGATGGAAAGGGCCTTGCATGGAAGCAAATTTCTCTTGCCACCAAAATTTCATAACCATCTGACTGACATGAAATTAGGGATAGGTGATTCTGCATCTAGTCTGTCACATTTTAGTGCATTGGACCGACCTAGTATGCAAAATGATCACTTTGTATCTCTTCCATCTTGGAGTTATGATAAAAACAGATCTAAATTTCCTGAAGGTGCTTCTGCTGAAACATCTGATAGACCAGGTACTTCTTCCAGTGTACTGACTGAAAGACCGTTTCTGCTCAATTCTTTTGGAACCAGTACCTTGGGCTCTTTAGGTTTGAATTGCTCAGGCAGCATTGATGCACAGCAGAAGGAGGATGACCAAGGAAACACCAAGCGTGGAAAATTGCCCATACTTCTAGATGGATCACCAAATGATATGCGTGATAATCATGTTAATGTAGCTAATGGCGAATCTACTAGCTCTGGATTGTTATCTAACCCCATAAGATCTGATCTTTTGCACTCAAAAGTAGAGGAAGTGGGTGGAAGCAGTACTTCAAAAGACAAGCTTCCCCACTGGTTACGAGAAGCTGTTAGCTCCCCCGCCAAACTTCCCAATCCTGAACTGCCACCCACAGTTTCAGCCATTGCTCAATCAGTTCGTCTGTTATATGGGGAAGATAAGCCCACAATTCCTCCATTTGTGATTCCTGGACCACCTCCTTCCGTACCAAAGGACCCCAGGTGTAGTGTCAAAAAGAAAAAGAAGAGAAGATCACAGAAGTTCAATCGGGGTCTTCCAGATTTTGCTGGAAACAGCAGAGACTTGCATAGCAGCCACCATGTTGATAATGGTGCCTCAAGCTCAATTCCTTCGGGCCCGCCATTGCCTCTACTTTCTCAGACAGGACCTCTAGGACCTCAGCAGATTGAATCTGACCTTAACTTGCCTTCCCTAAATTTGAAAGTGGCAAACTCGTCGCACTCTTCAAAAAAAGCAATTTCAGGGATGTCTCCATCTCCTGAAGTTCTTCAGTTGGTTGCATCCTGTGTTGCTCCCGGCCCCCATCTTCCACCGATCACCACCGGTTCTTCAAACTTTCATGACAGCAAGCATCCATTGCCAAGGCCTGTTGGCAGGGCCAAATTCAAAGACTCAGAAGGTGCCTTTAGAAATAAGAATCCTAGGCAGGCTTCACCAAAAATTTGGTGTCCACCTAAAGAGCAAGTACACGACCTTGACAGTGGAGATTCCAGCAAGACTCAGTCGGATCCCTCTCGGGTTGAACGGCCCGATGAAGTGGAGGTGTCATCTGAGGGAACTGTCTCAGACCATGCTGTGAGAGATCAGGAAACATAA 7017 0.414 MKENKSSAPKMLNRNWVLKRKRRKLPFGLDQSSGKDQSNSKEENSLTSESSRNASAKRALKTEVPTDQMSSKKKGNDGYYYECVICDVGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFEEKDQLKPINHLDPISKRARTKTVPTKSKGQINSLNLEKVSGLFGSKLISKKRSSSKGKSISTVGVKFFGKKLLSSSVDETGSDKPIDPSLGSPMEGTSSCVDADEKKSSLSPTDSPVDRKSTSPAKVVLTLSKITDLEANDEQLEGKTSSPCNKVPLRKTLVLAIAASGEDVRKRKNKVVNDNTSQKKQKTEKGKKIVNPSSTKSKSGNNKVHKKQKSITHSISASIPKEDVGNKNSQVQQKDEKFLRVMKDTSNELDKAQNCVDETLMHENSTAVVESLQVDRVLGCRIHGENTNSLNNLSLNIEGGSPSGDLVISENQTRLLEDNSTCANDLDAESTEDHVDDRQNVVKISDEEGMLINTNRVETIHVYRRSVTKESKKGNPIDSLSKATDDLGSCARDGIDQDDSAVSAEQLKKPNDKLEIEESINVALGSKDNSELPKNCETHVSIETEQKEMNVEKAMTGNIDEKAQDANAIDCAGPNGEEVFYEFLVKWVGKSHIHNSWISESQLKVLAKRKLENYKAKYGMSIINICEERWKQPQRVLALQTSKHGTSEGFVKWSGLPYDECTWESLDEPVLQNSSHLITLFNKLETLTLEKDSSKENSTRRNNDHQNDIFNLTEQPKDLKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFISSLYFEFKVSLPCLVLVPLSTMPNWLAEFSLWAPDVNVVEYHGCAKARAIIRQYEWHANDPSGLSKKTEAYKFNVLLTTYEMVLADYSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSSFEEKFNDLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSVEFLHEMRIKASAKLTLLHSMLKILHKEGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVADRQTAISRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDMSENNNSSKDEPVADVEHKHRKRTGGLGDVYKDKCTDSNSKILWDENAILKLLDRSNLQDGSTDNAEGDSENDMLGSVKALEWNDEPTEEHVVGESPPDGTDDMCPQNSEKREDNTVNVNEENEWDKLLRVRWEKYQNEEEAALGRGKRQRKAVSYREVYAPHPSETMSESGGEEEKEPEPEPEREYTPAGRAHKTKYVKLRSRQKEVLARRKAIKEANPEGLLSNELLSHSPAIAKGGDLAAGPTHSVQELTSINLEDSKYTQLSEAQNSNTDSLSRIDKLSKHKMSSYFDASVSNLGRSLPDIFLPSHPKGGLSMTNNMSTNNLLPVLGLCAPNAKQIESSETNTSKLNWRQNRHGSRQEFPFSLASMDADVRSKEVAANTKLADTSTENLHPSFKHTIPDNSLPFVPFPPSVQGKESDAFENSGARFSHFQEKVALTNLPFDERLLARFPLTTKSIPNSHLDLLPNLSIGGRLESLNGSMQDLPTMPALPNFKIPPEDLFRYNQQDRDVPPTLGLGQRSSTFSSFPENHRKVLENIMMRTGSGSSNLLKKKSKSDGWSEDELDSLWIGVRRHGRGNWDAMIRDPKLKFSKYKTSEDLSVRWEEEQVKVFQGPPFPTQRSSKMTKSTKSAHFPISDGMMERALHGSKFLLPPKFHNHLTDMKLGIGDSASSLSHFSALDRPSMQNDHFVSLPSWSYDKNRSKFPEGASAETSDRPGTSSSVLTERPFLLNSFGTSTLGSLGLNCSGSIDAQQKEDDQGNTKRGKLPILLDGSPNDMRDNHVNVANGESTSSGLLSNPIRSDLLHSKVEEVGGSSTSKDKLPHWLREAVSSPAKLPNPELPPTVSAIAQSVRLLYGEDKPTIPPFVIPGPPPSVPKDPRCSVKKKKKRRSQKFNRGLPDFAGNSRDLHSSHHVDNGASSSIPSGPPLPLLSQTGPLGPQQIESDLNLPSLNLKVANSSHSSKKAISGMSPSPEVLQLVASCVAPGPHLPPITTGSSNFHDSKHPLPRPVGRAKFKDSEGAFRNKNPRQASPKIWCPPKEQVHDLDSGDSSKTQSDPSRVERPDEVEVSSEGTVSDHAVRDQET 2338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13758g00004 2338 CDD SANT_TRF 1814 1858 - -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 1956 1977 - -
Vium13758g00004 2338 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1077 1236 IPR001650 -
Vium13758g00004 2338 SUPERFAMILY Chromo domain-like 657 704 IPR016197 -
Vium13758g00004 2338 ProSiteProfiles Myb-like domain profile. 1806 1862 IPR001005 -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 1395 1451 - -
Vium13758g00004 2338 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 770 947 IPR014001 -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 31 57 - -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 2118 2132 - -
Vium13758g00004 2338 Gene3D - 992 1219 IPR027417 -
Vium13758g00004 2338 ProSiteProfiles Zinc finger PHD-type profile. 80 127 IPR019787 -
Vium13758g00004 2338 Pfam PHD-finger 83 125 IPR019787 -
Vium13758g00004 2338 Pfam CHD subfamily II, DUF1087 1371 1412 IPR009463 -
Vium13758g00004 2338 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 62 2291 - -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 202 250 - -
Vium13758g00004 2338 Pfam SNF2-related domain 776 1051 IPR000330 GO:0005524|GO:0140658
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 2117 2198 - -
Vium13758g00004 2338 SUPERFAMILY Homeodomain-like 1813 1859 IPR009057 -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 2168 2198 - -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 2293 2338 - -
Vium13758g00004 2338 Gene3D - 749 991 IPR038718 -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 345 361 - -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 1395 1410 - -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 300 369 - -
Vium13758g00004 2338 Pfam Helicase conserved C-terminal domain 1077 1188 IPR001650 -
Vium13758g00004 2338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 733 982 IPR027417 -
Vium13758g00004 2338 ProSiteProfiles Chromo and chromo shadow domain profile. 665 727 IPR000953 -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 1 74 - -
Vium13758g00004 2338 Coils Coil 729 749 - -
Vium13758g00004 2338 CDD CD2_tandem 664 717 - -
Vium13758g00004 2338 Pfam Chromo (CHRromatin Organisation MOdifier) domain 666 717 IPR023780 -
Vium13758g00004 2338 CDD PHD2_CHD_II 83 124 - -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 2238 2338 - -
Vium13758g00004 2338 SUPERFAMILY FYVE/PHD zinc finger 80 129 IPR011011 -
Vium13758g00004 2338 ProSiteProfiles Chromo and chromo shadow domain profile. 583 651 IPR000953 -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 1246 1282 - -
Vium13758g00004 2338 ProSitePatterns Zinc finger PHD-type signature. 83 124 IPR019786 -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 1258 1282 - -
Vium13758g00004 2338 CDD SF2_C_SNF 1072 1199 - -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 2005 2031 - -
Vium13758g00004 2338 Gene3D - 577 652 - -
Vium13758g00004 2338 SMART chromo_7 547 653 IPR000953 -
Vium13758g00004 2338 SMART chromo_7 663 720 IPR000953 -
Vium13758g00004 2338 Gene3D - 1785 1887 - -
Vium13758g00004 2338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 984 1242 IPR027417 -
Vium13758g00004 2338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 136 IPR013083 -
Vium13758g00004 2338 Gene3D - 667 717 - -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 1343 1370 - -
Vium13758g00004 2338 SMART helicmild6 1103 1188 IPR001650 -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 2259 2277 - -
Vium13758g00004 2338 FunFam chromodomain-helicase-DNA-binding protein 1-like isoform X1 992 1219 - -
Vium13758g00004 2338 MobiDBLite consensus disorder prediction 300 325 - -
Vium13758g00004 2338 SUPERFAMILY Chromo domain-like 581 653 IPR016197 -
Vium13758g00004 2338 SMART ultradead3 754 958 IPR014001 -
Vium13758g00004 2338 CDD CD1_tandem 584 649 - -
Vium13758g00004 2338 SMART PHD_3 82 125 IPR001965 -
Vium13758g00004 2338 SMART DUF1087_2 1353 1418 IPR009463 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13758g00004 Vium-Chr13758 15178 40407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13758g00004 738 1231 RAD5 or RAD16-like Gene Family AT1G02670 26.712 9.38e-37 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Vium13758g00004 SNF2_N 1.2e-57 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13758g00004 - - gmx:100793933 4038.42