Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1371g00003 ATGATGAACTCACACAACCAACAGCTTTCCCTCTTATCTCTTTCTCTAGCACTTCTACTTCTCTCAGGTTTGAGAGTTGAGGCTAGGTTGCAACATCATGCGACCAGTTACCAAAAATTGTTTGTTTTTGGCGACTCCTATGTGGATACCGGAAACACGAGAATAGATCAACCTGGGTCGTGGAAAAACCCTTACGGCATAACTTTCCCCGGAAAACCTGCCGGAAGATTCTCGGACGGTAGAGTTCTAACAGACTACATTGCTAAGTTTTTGGGACTCAAATCGCCTCTTCCCTACAAATTTAGGAAATTGATTCCACAAAATTTGAAATACGGGATGAACTTTGCATATGGTGGTACTGGCGTGTTTGACACATCCTCCAAAAACCCAAACATGACAATCCAAATCGATTTCTTCAAGCAGTTGCTCAAAGAGAATGTGTACACAGCTTCAGACCTCAGCAAATCTGTAGCACTTGTCTCTGTCGCAGGAAACGATTACAATTTCTACTTGGCAAGAAATGGCTCTATTCAGGGTTTTCCCTCTTTCATCGCCTCGGTGGTTAATCAAACTGCAACGAACTTGCTTCGCATCCAAAGTCTGGGAGTAAAGAAAATTGTTGTGGATGGTCTACAGCCACTTGGATGTCTTCCTGGAAGCACAGCTTCATTATCATTCCAAAAATGTAACAGTACCTTCAACGACCTCGTACTGCTCCACAACAACTTGTTGAACCAAGCTGTGACTAGGTTGAATCAACAAACCAAGAAGCAAACAACATTCATCGTTCTTGATCTTTACGACAGTTTCTTGTCGGTGCTGAACCACCCATCTAGCAATAATATCAAGGACGCCTTCAAGCCTTGTTGCGTTGGTATAATTAGCCAATATTTTTGTGGAAGTGTGGATGAAAACAATGTCAAGAAATATAAGGTCTGTGATCATCCCAAATCAGCTTTCTTTTGGGACCTTCTGCATCCCACTCAAGCTGGTTGGCTTGCCGTGTACAACGAGTTGCAAACCACAAAAGCTCTTCAACAAATCCGATACTGA 1053 0.4274 MMNSHNQQLSLLSLSLALLLLSGLRVEARLQHHATSYQKLFVFGDSYVDTGNTRIDQPGSWKNPYGITFPGKPAGRFSDGRVLTDYIAKFLGLKSPLPYKFRKLIPQNLKYGMNFAYGGTGVFDTSSKNPNMTIQIDFFKQLLKENVYTASDLSKSVALVSVAGNDYNFYLARNGSIQGFPSFIASVVNQTATNLLRIQSLGVKKIVVDGLQPLGCLPGSTASLSFQKCNSTFNDLVLLHNNLLNQAVTRLNQQTKKQTTFIVLDLYDSFLSVLNHPSSNNIKDAFKPCCVGIISQYFCGSVDENNVKKYKVCDHPKSAFFWDLLHPTQAGWLAVYNELQTTKALQQIRY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1371g00003 350 Gene3D SGNH hydrolase 26 347 IPR036514 -
Vium1371g00003 350 PANTHER OSJNBB0059K02.9 PROTEIN 13 348 - -
Vium1371g00003 350 Pfam GDSL-like Lipase/Acylhydrolase 40 336 IPR001087 GO:0016788
Vium1371g00003 350 SUPERFAMILY SGNH hydrolase 39 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1371g00003 Vium-Chr1371 60699 64391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1371g00003 18 335 Pollen Coat Proteome AT1G75930 29.240 6.22e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1371g00003 - - gmx:100800932 535.798