Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1368g00009 ATGATTTTTACCGAGGATTTGTGGCCGCTGCTCCACCAACTGGTTGGAAACACTTCTCTCTTTTCAGAGAAACCGTCCTTCTTCCACAACCTTCTGGAATCGATGACCAACTCCACCTGCGCAGGCGCTGAGTTCGATCAGTGCCGAGACGAGTCGGCGGCGTTGGTTCTCAAATTCGTCACTATCGCCTCCATTCTCCTCTCCGGCATGGCCGGAATAGCGATCCCCCTCGTCGGAAAACACCGCCGCTTCCTCCGCACCGACGGCAACCTCTTCGTCGGTGCCAAGGCCTTTGCCGCCGGGGTGATCCTGGCCACGGGATTCGTCCACATGCTCTCTGATGCCACCGACGCGCTCCAGCACCCGTGCCTGCCTTCGTTCCCGTGGTCCAAATTCCCTTTCACCGGCTTCTTCGCCATGATGGCCGCGCTTTTCACTCTCCTCCTCGATTTCGTGGGAACGCAATACTACGAGCGCAAGCAGGGGCTCAACCGTCCCTCGGAGGAGCAGTCTCGGGTCGGGTCGTCCGAATCCGGAGGGAAGGTGTTTGGAGAAGAAGAGAGTGGGGGAATGCACATCGTGGGGATGCATGCACACGCCGCGCATCATCGACATAACCACCCCCATGGCCATGACTCGTGCCATGGCATTGGCGGCGAGAAGGAACAAGATAATGCGCTTGCTGACTCCCATGGACACGGTCACGGTCACCTCCACGGCCACTCCCACATGGAAGATGTCGAAGAAACCGACGTTCGACACGTCGTGGTTTCTCAGGTGTTGGAGCTTGGGATTGTGTCACATTCGGTAATCATCGGGTTGTCTCTTGGGGTTTCTCAAAGTCCTTGTACCATAAGGCCTCTGATTGCGGCGTTGTCTTTTCATCAGTTTTTTGAAGGGTTTGCGCTTGGAGGGTGCATTTCCCAAGCGCAGTTTAAAGCCTCCTCAGCAACCATAATGGCTTGTTTTTTTGCATTGACTACACCGTTGGGTGTTTCGATCGGAACGGCCATTTCTTCAAGGTTTAACCCTTACAGCCCCGGTGCACTCATCACCGAAGGTATTCTGGATTCCTTATCGGCGGGGATTTTGGTGTATATGGCTTTGGTAGATTTGATAGCTGCGGATTTTCTTAGCAAGAGAATGAGTTGTAACTTCAGGCTACAGATAGCCTCTTACTGCATGCTTTTCCTTGGAGCTGGATTGATGTCTTCGCTCGCAATTTGGGCCTGA 1233 0.5418 MIFTEDLWPLLHQLVGNTSLFSEKPSFFHNLLESMTNSTCAGAEFDQCRDESAALVLKFVTIASILLSGMAGIAIPLVGKHRRFLRTDGNLFVGAKAFAAGVILATGFVHMLSDATDALQHPCLPSFPWSKFPFTGFFAMMAALFTLLLDFVGTQYYERKQGLNRPSEEQSRVGSSESGGKVFGEEESGGMHIVGMHAHAAHHRHNHPHGHDSCHGIGGEKEQDNALADSHGHGHGHLHGHSHMEDVEETDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKASSATIMACFFALTTPLGVSIGTAISSRFNPYSPGALITEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIASYCMLFLGAGLMSSLAIWA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1368g00009 410 NCBIfam ZIP zinc/iron transport family 41 410 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vium1368g00009 410 MobiDBLite consensus disorder prediction 202 243 - -
Vium1368g00009 410 MobiDBLite consensus disorder prediction 211 243 - -
Vium1368g00009 410 Pfam ZIP Zinc transporter 57 407 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vium1368g00009 410 MobiDBLite consensus disorder prediction 161 182 - -
Vium1368g00009 410 PANTHER ZINC/IRON TRANSPORTER 54 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1368g00009 Vium-Chr1368 95529 97522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1368g00009 36 410 Inorganic Solute Cotransporters AT1G60960 71.835 2.03e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1368g00009 K14709 - gmx:100812212 667.922