Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13658g00003 ATGAAGAGTGAGGTGAAGTTGTTGGGAGCATGGCCAAGCCCATACGTGTTGAGGGTTCGGATAGCTCTAAACATGAAATCAGTGAAGTATGACTTCCATGAGGAAAAGTTATCGTCCAAAAGCCAGCTTCTTCTTCAATCCAACCCCATTTACAAGAAAATCCCAGTTCTCATTCATAAGGACAAACCCCTCTGCGAGTCTTTGATCATTGTGCAATATGTGGATGATGTTTGGCTCTCTGCCTCTCCCATTCTCCCTTCTGATCCTTATGACCGCGCCATTGCTCGTTTCTGGACCGTCTACATTGATCAAACGTTGTATCCAACCATGAGATCCATTAGAGGAGCTTCGGAAGAGGATGAGAAGAAGAGGTTGATAGAGGAAGTGAGAAAAGGATTGGCAATGTTGGAGGATGTGTTTAAAGATAGCAGCAAAGGCAAGGGCTTTTATGGTGGTGACCAAATTGGGTTGTTGGACATTGCACTTGGAAGC 492 0.4492 MKSEVKLLGAWPSPYVLRVRIALNMKSVKYDFHEEKLSSKSQLLLQSNPIYKKIPVLIHKDKPLCESLIIVQYVDDVWLSASPILPSDPYDRAIARFWTVYIDQTLYPTMRSIRGASEEDEKKRLIEEVRKGLAMLEDVFKDSSKGKGFYGGDQIGLLDIALGS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13658g00003 164 SFLD Glutathione Transferase (cytosolic) 2 163 IPR040079 -
Vium13658g00003 164 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vium13658g00003 164 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 163 IPR045073 -
Vium13658g00003 164 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Vium13658g00003 164 FunFam Glutathione S-transferase GSTU6 1 85 - -
Vium13658g00003 164 CDD GST_C_Tau 89 164 IPR045074 GO:0004364|GO:0006749
Vium13658g00003 164 CDD GST_N_Tau 5 78 - -
Vium13658g00003 164 Gene3D - 85 164 - -
Vium13658g00003 164 SFLD Main.3: Omega- and Tau-like 2 163 IPR045073 -
Vium13658g00003 164 SUPERFAMILY GST C-terminal domain-like 84 163 IPR036282 -
Vium13658g00003 164 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Vium13658g00003 164 Gene3D Glutaredoxin 1 84 - -
Vium13658g00003 164 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 164 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13658g00003 Vium-Chr13658 9986 11308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13658g00003 3 164 Glutathione S-transferase Gene Family AT1G10370 59.509 1.58e-67 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13658g00003 K00799 - vum:124822118 318.161