Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1364g00002 ATGCAGCTTCAATTTGATTCTCAGTTTCTTATGTCTATTCTGTTTCTTTCTTTTGTTGGCTTGTTATGTTATTTGTACACTTCTTTTGTGGACAAGCCAAATAGGCTTCGTTCTAAGCTCATGAAACAAGGTATCAGTGGCCCACCTCCAACTATTCTGCTTGGCAATATTTTGGAGTTACAGAAAGCTCGCTCTGCCACTTCAAAGTCTTCTTCTTCTTCTTCAAAAGTCCCTTCCTCTCACAACTGTGCTGCTCTTCTCCTTCCACTCTTTGATAAATGGAGAAACGAATATGGTCAAGTGTTCGTGTTTTCTCTTGGAACCATTCAAATAGTGTGTGTGAACCAACCAGACATAGTGAGAGAGGTCACTGTCTGCACATCCTTGGACATGGGGAAACCTGCATATCAACTGAAACACATTGGGCCTTTGGTGGGTCAAGGCATTTTAACTTCCAATGGGACTAAATGGGTTCATCAAAGAAAGATCATAGCTCCAGAACTATACATGGAAAAGGTTAAGGGAATGATGAATATAATTAGCGAGTCTGCTGTATCTGTGGTAAACTCGTGGAGTAATAGAATAGAAGCAGAAGGTGGAGTTGCTGACATCAAAATTGATGAGTGCATGAGAAACTTCTCTGGTAATGTTATTTCAAGAGCATGCTTTGGAAGCAATTATACCAAGAGTGAAGAGATTTTCTTGAAACTCACAGCTCTCCAAGAGTTATTGTCCTGGAAAAATTTATTCAGACGTATCCCTGGCATGTGCTACCTTCCAACAAAGACCAATAGAGAAATATGGACATTAGAAAAGGAGGTGAATGAAATGATACTCCAGGTGGTGAAGGAAAGAAAGGAAACTAGTTTTGAGAAGGACTTGCTGCAAATGGTTCTTGAAAATGTTAAGGACAGTAAGCCAAGTAAAGAGGCCATTGACGATTTCATAGTTGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACAACTGCAGTTTCTGCTACATGGTGCCTGATGCTGCTGGCCGCAAACCCAGATTGGCAAGATCGTGTTCGTGCTGAGGTCACAGAAATTTGCAGGGGTAGAATCCCAGATTTTAGTATGCTTGGTAAGATGAAGCAGCTAGCAATGGTTATTCATGAAGTATTGCGGCTTTATCCTCCTGTGACTGTGGTGTCAAGAGAGGCCTTGAAGGACATGAAATTTGGGAACCTTGATGTTCCAAAGGGGTTTAACCTTTGGATAATGGTAGTAAGTTTGCACACAAATCCTGATATATGGGGAGATGATGCCTACAAATTCAAGCCAGAAAGATTTGCCAATGGAACCATAGGTTCTTGTAAGCTGCCACACGTGTACATGCCCTTTGGGGTTGGTCCACGAGTGTGTCTTGGACAGAACTTGGCTATTGTGGAACTTAAGATGATCATAGCTCTCATATTGTCCAAATTCACTTTCTCACTCTCTCCACGCTACGTTCATTCGCCCACTCTCAGGTTGCTCATAGAGCCTGAGCATGGAGTCAATATCTTGGTAAAAAAAATATGA 1551 0.4152 MQLQFDSQFLMSILFLSFVGLLCYLYTSFVDKPNRLRSKLMKQGISGPPPTILLGNILELQKARSATSKSSSSSSKVPSSHNCAALLLPLFDKWRNEYGQVFVFSLGTIQIVCVNQPDIVREVTVCTSLDMGKPAYQLKHIGPLVGQGILTSNGTKWVHQRKIIAPELYMEKVKGMMNIISESAVSVVNSWSNRIEAEGGVADIKIDECMRNFSGNVISRACFGSNYTKSEEIFLKLTALQELLSWKNLFRRIPGMCYLPTKTNREIWTLEKEVNEMILQVVKERKETSFEKDLLQMVLENVKDSKPSKEAIDDFIVDNCKNIYLAGYETTAVSATWCLMLLAANPDWQDRVRAEVTEICRGRIPDFSMLGKMKQLAMVIHEVLRLYPPVTVVSREALKDMKFGNLDVPKGFNLWIMVVSLHTNPDIWGDDAYKFKPERFANGTIGSCKLPHVYMPFGVGPRVCLGQNLAIVELKMIIALILSKFTFSLSPRYVHSPTLRLLIEPEHGVNILVKKI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1364g00002 516 Gene3D Cytochrome P450 33 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Vium1364g00002 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 36 508 - -
Vium1364g00002 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 Pfam Cytochrome P450 91 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1364g00002 516 SUPERFAMILY Cytochrome P450 84 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1364g00002 Vium-Chr1364 46721 53318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1364g00002 119 513 Cytochrome P450 AT5G24900 42.506 7.17e-124 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1364g00002 K24544 - gmx:100785420 834.328