Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium13636g00002 | ATGTGGAAATTTAAGCCATTTGGCCACAAAGAGCAGACTGGTCTTGAAGGCCGCACTGTAGATGTTGGTAATCTTAAAATAAACATTGTTAAGGCCATTGCGGAAGGAGGGTTCTCTTGTGTCTACCTAGCTCGTGATGCTGTACATATGTCAAAGCAATATGCCTTGAAGCACATAATATGCAATGATGAGGAATCACTCGGATTGGTAAAGAAGGAGATATCTGTGCTTAAGATGCTGGTAGGACATCCCAATGTTGTCACACTTCATGCACATGCTATCTTTGATATGGGTAGGACAAAGGAGGCATTCCTTGTGATGGAATTTTGTGAGAAGTCTCTGGTCAATGTGCTGGAGAGCCGCGGAGCTGGTTATTTTGATGAGACACAGGTTCTTTTGATCTTCAGGGATATCTGTAATGCAGTTTTTGCTATGCATTGCCTATCCCCACCTATTGCACACCGGGACTTGAAAGCGGAGAATCTTTTATTAAGTTCAGATGGCTTATGGAAGTTATGTGATTTTGGAAGCACTTCCACTAATCACAAACGTTTTGAAAAGCCAGAAGAAATGGGGATTGAGGAAGACAATATCCGGAAGTATACAACTCCAGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCCTGAGAGAGGTCATTAATGAGAAGGTAGACATATGGGCTCTTGGATGTCTTCTTTTTCGAATATGCTACTTCAAAAGTGCATTTGATGGAGAATCAAAGCTTCAAGTCTTAAATGGAAACTACCGTATTCCCGATTTACCGAAATACAATTCATCTATCACGGACTTGATAAGAGACATGCTCCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTTAACGAGCAACTGCCCATTAATCTACAGAAGTCATTACCTGACAGGCCACCTGAATCACCCTCACCCAACAATCATGAAGGTATCTCAATGCCCTCAAACAGATCACCTCCAATGCCTCGTAGGAACCCGCCTCCTCCGCCTTCATCTGGAGAACCCAAGACTACACCACAGCCATCCCTTGCTTCTAGGGGAGGGGGCAGTGGGGGGCAGCTTGGTGCTTTCTGGTCCAGTCAGCACGCAAAGGATCCACTTGTCACTGAGGACAAGAGCAAGCCAATTTTTGATGAAGAACCATCCAGTCACCATATGCCACTGAAACATGATAGATTTCGTCCTGAAAATGAACAATTAGCCAAAAATGTTAGTACTAGCAAAGTGGTTAATGCACAAACTCATACTGTGAAAAGCAGTACACATGGAAAATTAAACAAGCCTGATACCAAACCCTCGAAGGATTTTGAAATAAACTTATTCCAAGATAAAGATCGAATGGAGAATACGGCTAACTTTCAGAACCAGGCTTTTAACTCTTTTGTTGCTGAATTCGATACCACTAAGCTCAACACTGGACTTAATAACAAATCCGAAAGGGAACAAGCATTAGAGGCTGAAGTGGAGAAACTCAAAGAGCAGCTGAAGGAAGCTAACGTGGAAAAAGCTGAAATAACCTCAAAGTTTGAAAAGCTTTCTGCTATCTGCCGATCCCAGAGGCAAGAATTGCAGGATCTCAAGCAAGCACTGGCAGGTCGGACTCCTTCACCAAGCAGAGAGGGTTTGAAAACCTCTCCTGCAATTACATCATCTGCACCTATGCAGGATAGAACTGAATGGAAAACTCCCAGTTCAGAACCTAAGTCATGGCAAGCTTTTCCTGAGGAACCCCAACAACAGAAGTCCCTTTCAGCAGGAAATACTACCAAATCAGTCAGGACAAATAATGGCAGGCAAAACAAGCAACCTGTTCAACTGGCTACTAATTTTGATTCATGGGGTTTTGGAACTGATAGCTTCAGTGCTGTACCTACTGGCAGCTCACAGATGCAAAGATCTAGCAGTGCCGGAGGTAAGTCTCAGGGTTTTGATGAGGCAAAGAGCTTTGAGAGCAAACCAACTTCTCAACCAGCTGGTTGGGCTGGTTTTTAA | 2022 | 0.4392 | MWKFKPFGHKEQTGLEGRTVDVGNLKINIVKAIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLGLVKKEISVLKMLVGHPNVVTLHAHAIFDMGRTKEAFLVMEFCEKSLVNVLESRGAGYFDETQVLLIFRDICNAVFAMHCLSPPIAHRDLKAENLLLSSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYNSSITDLIRDMLQARPDDRPDITQVWFRVNEQLPINLQKSLPDRPPESPSPNNHEGISMPSNRSPPMPRRNPPPPPSSGEPKTTPQPSLASRGGGSGGQLGAFWSSQHAKDPLVTEDKSKPIFDEEPSSHHMPLKHDRFRPENEQLAKNVSTSKVVNAQTHTVKSSTHGKLNKPDTKPSKDFEINLFQDKDRMENTANFQNQAFNSFVAEFDTTKLNTGLNNKSEREQALEAEVEKLKEQLKEANVEKAEITSKFEKLSAICRSQRQELQDLKQALAGRTPSPSREGLKTSPAITSSAPMQDRTEWKTPSSEPKSWQAFPEEPQQQKSLSAGNTTKSVRTNNGRQNKQPVQLATNFDSWGFGTDSFSAVPTGSSQMQRSSSAGGKSQGFDEAKSFESKPTSQPAGWAGF | 673 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium13636g00002 | 673 | Pfam | Protein kinase domain | 30 | 289 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium13636g00002 | 673 | Coils | Coil | 484 | 539 | - | - | |
Vium13636g00002 | 673 | SUPERFAMILY | Protein kinase-like (PK-like) | 28 | 343 | IPR011009 | - | |
Vium13636g00002 | 673 | Gene3D | Transferase(Phosphotransferase) domain 1 | 10 | 306 | - | - | |
Vium13636g00002 | 673 | PANTHER | SERINE/THREONINE PROTEIN KINASE | 1 | 656 | - | - | |
Vium13636g00002 | 673 | SMART | serkin_6 | 27 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium13636g00002 | 673 | ProSiteProfiles | Protein kinase domain profile. | 27 | 297 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium13636g00002 | 673 | MobiDBLite | consensus disorder prediction | 301 | 367 | - | - | |
Vium13636g00002 | 673 | FunFam | probable serine/threonine-protein kinase DDB_G0280111 | 10 | 305 | - | - | |
Vium13636g00002 | 673 | CDD | STKc_GAK_like | 26 | 298 | - | - | |
Vium13636g00002 | 673 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 152 | 164 | IPR008271 | GO:0004672|GO:0006468 | |
Vium13636g00002 | 673 | MobiDBLite | consensus disorder prediction | 329 | 346 | - | - | |
Vium13636g00002 | 673 | MobiDBLite | consensus disorder prediction | 539 | 673 | - | - | |
Vium13636g00002 | 673 | MobiDBLite | consensus disorder prediction | 548 | 665 | - | - | |
Vium13636g00002 | 673 | MobiDBLite | consensus disorder prediction | 424 | 445 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium13636g00002 | Vium-Chr13636 | 582 | 5580 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium13636g00002 | 26 | 292 | Miscellaneous Gene Families | AT2G34180 | 29.893 | 1.06e-20 | 94.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | NAK | Vium13636g00002 | Pkinase | 1.9e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium13636g00002 | K08853 | - | gmx:100808507 | 1127.85 |