Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13510g00001 ATGGTGGTGGCGGAGTCTGAGATGAACTCACAAAACGACGATGAATCTTCGATAGAGTTGGAGCAACAGCACGACGTCAACAAGAATCACCCATTCTCTTCATTGGGAAGAGAAGCTTCTTCCATCTACTCCATCACCCTCGACGAGTTCCAACACACGCTATGGGAGAATGGCAAGAACTTTGGGTCCATGAACATGGACGAGTTTCTCAGCAGCATATGGTGTGCAGAAGAAATTCAAATTTTAAACAACAGCAACAGCAGCATCAACGTTAGCAGCTTCTCACTGAATGAAGCTTCCGCAGAAAAAGGGTTGATAAGGAAGCAACCGAGCCTTCCTCGGCAAGGGTCTCTAACACTTCCTGCACCTTTGTGTAGGAAAACAGTGGACGAGGTTTGGTCTGAGATACACAAAGGACAACAACAACGGCAACCACAGAAAAACAACGACAATAACTGTGGAAGCGTTAATAATGATAACAATGCTCAAAATACCGATTCTGCCAGTCGCCAACCTACCTTTGGAGAGATGACTTTGGAGGACTTCTTGATAAAAGCTGGGATAGTTCGTGAACAGTGTGCCATTGCAACGCCAGTTCCAGCTTCTACAAGTCAAAATCAGCATTTGCAGCAGTATGGCTTCTTTCCTAATAACAACCGTACAATGGAGCCTTCTTTTGTCGGAAGGCAGGTGATGGGGCTTGGTGGCGGCGGTTTCGGCGGTAGTGCTGGTGGGAATGTGGTTAGACCACCTTATCAGGCGGTGACTAAGGGTGGTGGTGGGGGTGGTGCAGTTGGACAGTCTTCTGGGTATCCGGCGGCAGTGCCGTCAGCGGTTTGCTTTGGACCGAGGGCGGTGAATGGTGGCGGTGGTTACGAGGCAGTGAGCAACGTGGGAGTGGTGGCGCCGGTGAGCCCGGTTTCGCCGGAGGGGATAGGTACTGGTGAAAATTTTGGTTCCAGATTTGGGATGGACAAAGTTGTGTCAAGAGGGAGAAAGAGGGCGTTTGATGGGCCTGTGGAAAAGGTGGTGGAGAGAAGACAGAGGAGGATGATCAAGAACAGAGAATCAGCAGCCAGATCCAGAGCAAGAAAACTGGCATACACAGTTGAATTAGAAGCAGAATTGACCCAGTTGAAAGAAGAGAACGCCGAACTTAAACTATCACTGGCTGATCTTGAAAGGAGAAGAAAGCAACAGCATTTAGAGGAAGGGAATTGGAGAGTTCAAAACAACCTTCAAAAGGCCAAAAATAAATCGAGATCATTGAGAAGGATCATGAGTTGCCCTTTATGA 1296 0.4823 MVVAESEMNSQNDDESSIELEQQHDVNKNHPFSSLGREASSIYSITLDEFQHTLWENGKNFGSMNMDEFLSSIWCAEEIQILNNSNSSINVSSFSLNEASAEKGLIRKQPSLPRQGSLTLPAPLCRKTVDEVWSEIHKGQQQRQPQKNNDNNCGSVNNDNNAQNTDSASRQPTFGEMTLEDFLIKAGIVREQCAIATPVPASTSQNQHLQQYGFFPNNNRTMEPSFVGRQVMGLGGGGFGGSAGGNVVRPPYQAVTKGGGGGGAVGQSSGYPAAVPSAVCFGPRAVNGGGGYEAVSNVGVVAPVSPVSPEGIGTGENFGSRFGMDKVVSRGRKRAFDGPVEKVVERRQRRMIKNRESAARSRARKLAYTVELEAELTQLKEENAELKLSLADLERRRKQQHLEEGNWRVQNNLQKAKNKSRSLRRIMSCPL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13510g00001 431 SUPERFAMILY Leucine zipper domain 346 396 IPR046347 GO:0003700|GO:0006355
Vium13510g00001 431 MobiDBLite consensus disorder prediction 138 174 - -
Vium13510g00001 431 MobiDBLite consensus disorder prediction 135 174 - -
Vium13510g00001 431 Pfam bZIP transcription factor 346 398 IPR004827 GO:0003700|GO:0006355
Vium13510g00001 431 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 349 364 IPR004827 GO:0003700|GO:0006355
Vium13510g00001 431 Gene3D - 344 397 - -
Vium13510g00001 431 Coils Coil 369 403 - -
Vium13510g00001 431 MobiDBLite consensus disorder prediction 1 21 - -
Vium13510g00001 431 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 344 396 IPR004827 GO:0003700|GO:0006355
Vium13510g00001 431 MobiDBLite consensus disorder prediction 1 16 - -
Vium13510g00001 431 CDD bZIP_plant_BZIP46 346 400 - -
Vium13510g00001 431 SMART brlzneu 342 408 IPR004827 GO:0003700|GO:0006355
Vium13510g00001 431 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 37 429 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13510g00001 Vium-Chr13510 2273 6302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13510g00001 1 400 bZIP Transcription Factor Family AT2G36270 47.884 1.30e-103 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vium13510g00001 bZIP_1 9.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13510g00001 K14432 - gmx:100790948 567.77