Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium134g00003 ATGACGTCGGGGACGAGACTACCCACGTGGAAGGAGAGAGAGAACAACAAGAGAAGAGAGAGAAGAAGAAGAGCCATAGCAGCGAAGATCTTCGCAGGTCTGCGGATGTATGGAAACTTCAAACTCCCCAAACACTGCGACAACAACGAAGTCCTCAAAGCCCTTTGCAACGAAGCAGGTTGGACCGTTGAACCAGATGGAACCACTTACCGCAAGGGATGCAAGCCTTTAGAGCGCATGGACATAGTTGGTGGATCATCAGCAGCAAGTCCTTGCTCATCCTACCATCCAAGTCCATGTGCTTCCTACAATCCAAGCCCAGGCTCATCTTCCTTCCCAAGTCCATCTTCATCTCCATACACCAACATTCCTAATGCTGATGGCAATTCTCTCATTCCATGGCTCAAAAACCTCTCAACTGCTTCATCTTCTGCATCGTCTCCAAAACTTCCCCATCTCTACCTCCACAGTGGCTCCATCAGTGCTCCTGTCACACCTCCTCTGAGCTCTCCAACAGCCAGAACACCACGAATCAACGCCGAGTGGGAGGATCAGTCTGTGCGGCCGGGGTGGACCAGACAGCAGCACTACTCATTCCTGCCATCTTCTAGTCCTCCGAGTCCCGGGCGCCAAGTTGTTGACCCCGAATGGTTTGCTGGGATCAAACTTCCTCATGTTAATCCAACCTCACCAACGTTTAGCTTGATCTCCTCAAACCCTTTTGCCTTCAAGGAAGATGGTTTGGCCGGCAGTGGTTCAAGAATGTGGACTCCTGCTCACAGTGGAACATGCTCTCCTGCTGTTGCACCAGGAACTGATAACAATGCTGACATTCCAATGTCTGAAGCTGTTTCAGATGAATTTGCATTTGGAAGCAACATGCTGGGGCTTGTGAAGCCATGGGAAGGAGAAAGGATTCATGAGGAATTTGGATCAGATGATCTTGAACTCACACTTGGTAACTCAAAGACCAGATGA 978 0.499 MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSSAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYTNIPNADGNSLIPWLKNLSTASSSASSPKLPHLYLHSGSISAPVTPPLSSPTARTPRINAEWEDQSVRPGWTRQQHYSFLPSSSPPSPGRQVVDPEWFAGIKLPHVNPTSPTFSLISSNPFAFKEDGLAGSGSRMWTPAHSGTCSPAVAPGTDNNADIPMSEAVSDEFAFGSNMLGLVKPWEGERIHEEFGSDDLELTLGNSKTR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium134g00003 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Vium134g00003 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vium134g00003 325 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium134g00003 Vium-Chr134 18654 23718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium134g00003 1 325 BZR Transcription Factor Family AT1G78700 70.149 5.51e-140 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vium134g00003 BES1_N 3.1e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium134g00003 - - gmx:100795369 572.778