Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13467g00001 ATGGAGAGTGGAAGAATGATCCACTGGTTAAATCTTGTAGCCTGTGTACTGCTACTGCTTAAGGCAGAAGGATCTTTGGTTCCACTGACTTTGGTCGAAAATGCACTGTCGAAAGGAGCTGTTTGTTTGGATGGAAGTCCCCCAGCTTACCACTTTGATAAGGGAGCTGGAGAAGGGGTTAACAACTGGATTGTCCACATGGAGGGAGGAGGATGGTGCAAAGATGCCGACGATTGCCTTGGCCGTAAGGACACTCGCTTAGGTTCATCTAACCAAATGGTTGAGGATCTTTACTTTTCTGGAATTTTAGGCAACGAGCGAGAGTATAATCCTGATTTCTACAACTGGAATAGAGTCAAGATTAGGTACTGTGATGGGTCATCGTTCACTGGTGATGTGGAAGAAGTTGATCCAACAAACAAATTGTACTTCAGAGGAGCAAGGATTTTTTCAGCTGTAATGGATGATTTATTAGCAAAAGGAATGGACAAGGCTGAAAATGCTATTCTCTCCGGCTGTTCAGCTGGAGGATTGACTACCATATTACACTGTGACAATTTTAAATCTCTGTTACCTTCTGGAGCTAATGTAAAATGTGTTCCAGATGCTGGTTTTTTTATCAATGTAGAGGATATCTCAGGAACACGTTTCATTGAAGACTATTACAGTAAAGTTGTGTCGACACATGGCTCGACAAAGAATTTGCCCTCATCTTGCACTTCAAAACTCAGCCCAGGACTGTGCTTTTTCCCAGAATATGTGCTATCACATATCAGTACCCCAATCTTCATTGTAAATTCAGCCTATGACTCATGGCAGATTCGGAACATCTTGGCACCTGGCGCTGCTGATCCAAGTGACAGTTGGCATAGCTGCAAGCTTGATTTAAGCAAATGCTCACATGATCAACTAAGTATAGTGCAAGGCTTCAAGAAGGAATTCGAGAAGGCAGTGAGTGTGGTTGGAGACTCTTCATCTAGAGGAATGTTTATAGACTCTTGCTTTGATCACTGTCAAACAGAATCACAGGAAACATGGTTTAAAAGTGACTCACCACATCTTGCCAATACAACAATTGCAAAAGCAGTAGGGGACTGGTTTTATGGTCGAGGTTCTTTCGATCAAATAGATTGCAACTATCCTTGCAACCCCACTTGTCAGAACCTTGTTTCTGATCTAAAAGACCACCCTGGAATATAG 1200 0.425 MESGRMIHWLNLVACVLLLLKAEGSLVPLTLVENALSKGAVCLDGSPPAYHFDKGAGEGVNNWIVHMEGGGWCKDADDCLGRKDTRLGSSNQMVEDLYFSGILGNEREYNPDFYNWNRVKIRYCDGSSFTGDVEEVDPTNKLYFRGARIFSAVMDDLLAKGMDKAENAILSGCSAGGLTTILHCDNFKSLLPSGANVKCVPDAGFFINVEDISGTRFIEDYYSKVVSTHGSTKNLPSSCTSKLSPGLCFFPEYVLSHISTPIFIVNSAYDSWQIRNILAPGAADPSDSWHSCKLDLSKCSHDQLSIVQGFKKEFEKAVSVVGDSSSRGMFIDSCFDHCQTESQETWFKSDSPHLANTTIAKAVGDWFYGRGSFDQIDCNYPCNPTCQNLVSDLKDHPGI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13467g00001 399 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
Vium13467g00001 399 PANTHER NOTUM-RELATED 14 388 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13467g00001 Vium-Chr13467 393 4561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13467g00001 5 399 Carbohydrate Esterase AT4G19420 55.116 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13467g00001 K19882 - gmx:100780707 688.337