Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13410g00001 ATGGAGATATCGAAAGCGATGGACGCTCTCCGAGAGAGAGCGACGGTCGTAAAGGAGTCACTTCACAAGAGCCAGACCATCACCGATAACATGGTCTCCATTCTCGGTTCCTTCGATCATCGTCTCTCCGCACTCGAAACCGCCATGCGTCCCACTCAGATAAAAACGCATTCAATTCGTAGTGCACATGATAACATTGACAAGACTCTAAAAGCAGCAGAGGGTATTTTGGCGCAATTCGACCAGACACGAATGGCTGAGGCTAAAATACTTCGAGGGCCGCACGAGGATCTAGAAAGCTATTTAGGAGCAGTTGATCAGTTGAGGGCAAATGTTCGTTTCTTTAGTAGTAAAAAGAGCTTCAAAAGTAGCGAGGCTATGGTCACCCATGCTAATAACTTGCTTGCCAAAGCTATCACAAAGTTAGAAGAGGAATTCAAACATCTTTTGACAAATTATAGTAAACCTGTGGAACCTGATCGCCTTTTCGAGTGCCTACCAAACTCCCTAAGGCCCTCAAATTCTGGGAAGCAAAGTGAGGGTGGTGGAAGAAACCACTCCGGAAAACAAAGTTCAGAAGCTGTCACTTTCACACTTCCAACTCTCATTCCACCAAGAGTCATACCTTTGCTACATGATTTAGCACAACAAATGGTTCAAGCTGGCCATCAACAACAACTTTTTCGAATATACAGAGAAACCCGAGCGACAGTCCTGGAACAAAGTCTTAGGAAGTTAGGTGTCGAAAGGTTGAGTAAGGATGACGTTCAGAGAATGCAATGGGAGGTTTTGGAGGCAAAGATTGGCAATTGGATTCATTACATGAGGATTGCTGTCAAATTGTTGATTGCTGGAGAGAAGAAAATTTGTGATCAAATATTTGATGGTGTGGACTCTTTGAAATCTCAATGTTTTGCTGAGGTGACTGCTAGTAGTGTGGCTATGCTTCTTAGTTTTGGAGAGGCTGTTGCAAAAAGTAAGAGGTCACCTGAGAAATTATTTGTTCTTTTAGACATGTATGAGATAATGAGAGAGCTTCAACCAGAGATTGAGAAACTTTTTGAAAGTAAGGCATGCACTGAAATGAGAGAAGCTGCAATAAATTTGTCAAAGAGATTAGCTCAAACTGCCCAAGAAACCTTTGTTGATTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAAACTACTGTAATGGATGGAACTGTCCACCCTTTAACCAGCTACGTGATCAATTACGTGAAGTTTCTGTATGATTATCAATCAACCTTGAAACTACTTTTTCATGAGTTTGATCCCAATGACCCGGACGGACAATTAGCAATTATTACAACAAGGATTATGCAGGCTCTCCAAACTAACTTGGATGGAAAATCAAAACAATATAAAGATCCAGCACTGACCCAGTTGTTTCTTATGAATAACATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTAGGAGATGATTGGGTGCAAATACATAGAAGAATTGTGCAACAGCATGCAAATCAGTATAAAAGGATTTCTTGGGCAAAGATTTTACAATGCCTCACTGTCCCAGCAAGTGAAAACAATAATGCAGTCACAAGAACAATGATTAAAGATAGATTCAAGACATTTAACGATCAAATTGAAGAGCTTCATCAACGGCAATCTCAATGGACTGTTCCCGACAGTGAATTGCGTGAATCTCTTAGATTGGCTGTTGCTGAAGTCTTGTTGCCCGCATATAGATCTTTCCTAAAACGTTTTGGGCCCGTGATAGAGAACGGCAAAAATCCTTATAAGTACATGGTATATTCTCCTGAACATCTTGAGCAAATGCTGGGTGAATTTTTTGAAAGCAAGATATGGGGTGAACCAAAGCGATAA 1887 0.4107 MEISKAMDALRERATVVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEGILAQFDQTRMAEAKILRGPHEDLESYLGAVDQLRANVRFFSSKKSFKSSEAMVTHANNLLAKAITKLEEEFKHLLTNYSKPVEPDRLFECLPNSLRPSNSGKQSEGGGRNHSGKQSSEAVTFTLPTLIPPRVIPLLHDLAQQMVQAGHQQQLFRIYRETRATVLEQSLRKLGVERLSKDDVQRMQWEVLEAKIGNWIHYMRIAVKLLIAGEKKICDQIFDGVDSLKSQCFAEVTASSVAMLLSFGEAVAKSKRSPEKLFVLLDMYEIMRELQPEIEKLFESKACTEMREAAINLSKRLAQTAQETFVDFEEAVEKDATKTTVMDGTVHPLTSYVINYVKFLYDYQSTLKLLFHEFDPNDPDGQLAIITTRIMQALQTNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVPASENNNAVTRTMIKDRFKTFNDQIEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPVIENGKNPYKYMVYSPEHLEQMLGEFFESKIWGEPKR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13410g00001 628 MobiDBLite consensus disorder prediction 165 192 - -
Vium13410g00001 628 Pfam Exo70 exocyst complex subunit 270 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium13410g00001 628 SUPERFAMILY Cullin repeat-like 76 619 IPR016159 -
Vium13410g00001 628 MobiDBLite consensus disorder prediction 168 192 - -
Vium13410g00001 628 Gene3D Exocyst complex component Exo70 75 628 - -
Vium13410g00001 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 619 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13410g00001 Vium-Chr13410 4429 11304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13410g00001 1 628 EXO70 exocyst subunit family AT5G52340 77.725 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13410g00001 K07195 - gmx:100779774 1154.81