Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1339g00103 ATGGTTGTGGAAGATTCACAAAAATCAACTATCACCGATGACCAAAACCCTAGCAGGGTCGACAACGACGACGACGATCTCGAAGATGGGGAGATCCTCGAAGATGCCGACGACGCCGCCTCGGCTGCCTCCAAGCCTCCGTCCGCACTCCTCCGCAACCCCCACCCTCTCGAGAATTCCTGGACCTTCTGGTTCGACAGCGCTTCCGCCAAGTCCAAACAAGCCGCATGGGGCAGTTCCATCCGACCCATATACACCTTCGCCACCGTCGAAGAGTTTTGGAGCATTTACAATAACATTCACCACCCGAGCAAGTTGGGTGTGGGGGCGGACTTTCACTGCTTCAAGTATAAGATTGAGCCCAAATGGGAGGACCCTATCTGCGCCAATGGTGGAAAATGGACCATGACTTTCCAAAGGAACAAATCTGATACCAGTTGGTTGTATACGTTGTTGGCAATGATTGGAGAACAGTTTGATCACGGAGATGAAATTTGTGGAGCTGTCGTGAATGTCAGAAATAGGCAGGATAAAATTTCTATTTGGACTAAGAATGCTTCAAATGAAGCTGCTCAGATGAGCATTGGAAAGCAGTGGAAGGAGTTTCTTGATTACAATGAGACAATAGGCTTTATATTTCATGAGGATGCAATGAAGCATGAGAGGAGTGCTAAAAATAAATACGTGATATGA 693 0.4762 MVVEDSQKSTITDDQNPSRVDNDDDDLEDGEILEDADDAASAASKPPSALLRNPHPLENSWTFWFDSASAKSKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLGVGADFHCFKYKIEPKWEDPICANGGKWTMTFQRNKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRNRQDKISIWTKNASNEAAQMSIGKQWKEFLDYNETIGFIFHEDAMKHERSAKNKYVI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1339g00103 230 MobiDBLite consensus disorder prediction 1 53 - -
Vium1339g00103 230 SUPERFAMILY eIF4e-like 51 226 IPR023398 -
Vium1339g00103 230 MobiDBLite consensus disorder prediction 1 16 - -
Vium1339g00103 230 Pfam Eukaryotic initiation factor 4E 56 208 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vium1339g00103 230 Gene3D RNA Cap, Translation Initiation Factor Eif4e 48 230 IPR023398 -
Vium1339g00103 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 25 220 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vium1339g00103 230 MobiDBLite consensus disorder prediction 19 36 - -
Vium1339g00103 230 FunFam Eukaryotic translation initiation factor 4E 47 230 - -
Vium1339g00103 230 ProSitePatterns Eukaryotic initiation factor 4E signature. 111 134 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1339g00103 Vium-Chr1339 763755 765796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1339g00103 1 229 Eukaryotic Initiation Factors Gene Family AT4G18040 62.041 3.01e-110 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1339g00103 K03259 - gmx:100793288 408.683