Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13395g00001 ATGGTGTGCATAAGGAAGGCGACGGTGAAGGATCTTCTGGCGATGCAGGCTTGCAACCTGTTCTGCCTCCCTGAGAACTACCAGATGAAGTACTATCTCTACCATATCCTCTCCTGGCCTCAGCTCCTCTACGTTGCCGAAGACTACAACGGTCGCATCGTCGGCTACGTCCTCGCCAAGATGGAGGAAGAGACCACCGACTGCCACGGCCACATCACCTCCCTCGCCGTCCTCCGCACCCACCGCAAACTCGGTCTCGCCACCAAACTCATGACCGCCGCCCAGAACGCCATGGAACAGGTGTTTGGTGCTGAGTATGTGTCCCTGCACGTGCGCAAGAGCAACCGCGCGGCCTTCAATTTGTACACAGAGACCTTGGGGTACAAGATTCATGATGTGGAGGCTAAGTATTATGCGGACGGAGAAGATGCTTATGACATGAGGAAGGAGCTTAAAGGGAAGCAGCACCACCACCATCATCATCACCACCATCACCACCACCACCATGAGCATGGTGGTGGGTGTTGTGGTGGGGAGGTCAAGGGAAATGCTAAAGCCAACTGA 564 0.5532 MVCIRKATVKDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETTDCHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKELKGKQHHHHHHHHHHHHHHEHGGGCCGGEVKGNAKAN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13395g00001 187 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 171 IPR045047 GO:0004596|GO:0006474|GO:0031415
Vium13395g00001 187 MobiDBLite consensus disorder prediction 152 171 - -
Vium13395g00001 187 MobiDBLite consensus disorder prediction 152 187 - -
Vium13395g00001 187 CDD NAT_SF 43 110 - -
Vium13395g00001 187 Gene3D - 2 175 - -
Vium13395g00001 187 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Vium13395g00001 187 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Vium13395g00001 187 FunFam N-alpha-acetyltransferase daf-31-like 2 175 - -
Vium13395g00001 187 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13395g00001 Vium-Chr13395 1376 2533 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium13395g00001 Acetyltransf_1 8.7e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13395g00001 K20791 - gmx:100800073 326.635