Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1319g00019 ATGGGTTTCCGCATTCCAGCTATCATTAGACAAGCATCATTTTCTACTGCAAAAACAACTCGCAAGGGACTTGAAGTCCCAAAAGGCTACCTTGCAGTCTATGTTGGAGATAAGATGAGGCGGTTCATGATTCCTGTATCATATTTGAATCAATCTTCGTTTCAACAATTGCTAAGTCAGTCAGAAGAAGAATTTGGATATGATCATCCAACTGGAGGTCTCACAATTCCATGCAAGGAGGAGGAGTTCATAAACGTTATCTCTCATTTGAATTAG 276 0.3986 MGFRIPAIIRQASFSTAKTTRKGLEVPKGYLAVYVGDKMRRFMIPVSYLNQSSFQQLLSQSEEEFGYDHPTGGLTIPCKEEEFINVISHLN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1319g00019 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 20 90 IPR003676 GO:0009733
Vium1319g00019 91 Pfam Auxin responsive protein 13 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1319g00019 Vium-Chr1319 100189 100859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1319g00019 15 83 Calmodulin-binding Proteins AT3G43120 52.174 4.14e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1319g00019 - K14488 vum:124825808 175.252