Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13174g00009 ATGTTTGGTAGAACACCCAGCGTCTGTAATTGGTGTGGAAGAGTAGCACCATCTTTGTTTTTCCCACTTTATCTTCCAAATCTTAATCGTAATCCAATTTGTTCATTGTCAACGCTCATCACTCCAACTCCAACAACGCTTCCCCTCACTGCAAGAAGGTTTTCGTTTTCACCACTTTCACCAATGGAAGACGAAAACCAAGCCACGGAGCAGGAATACGCCTTTCACTCCGACCTGCTCCACCAATTCACCGCCATCCCCTCCGTCGACAAGGCATGGCTCTTCAACCCCCACGCCGGCTTGGCTTCGCAGGCAATGTTTTGCGTTAGTCAACCCAACCTTTTGACCAACAAGAGGAAGAAGTCCATCCTCTCCGCTTCCCTGCTCAGACAAAGCGACGGCACCGTTGCGTTTCACTGGGCTCCCTTTCCGATCGAATTGAGCGGAGTCTCCGCCATGGTTCCGTCGCCTTCTGCCTCCAAGCTGCTGATTGTTCGGAATCCCGAGAATGAAGGTCCTTGCCGCTTTGAAATTTGGAGCTCCTCTCAACTGGAAAAGGAGTTCCATGTCCCTCAATCTAAGCACGGTTCTGTGTACACTGATGGATGGTTTGAGGGGATCTCTTGGAATTTGAATGAAACTTGTATAGCGTATGCAGCTGAAGAGCCAGCTCCTGCAAAGCCCACATTCAATGATCTGGGTGGCTACCAGAAACGTAGTTCTTCAGACAAGGATGGTGGTACCTGGAAAGCTCAAGGAGAATGGGAGGAAGAATGGGGAGAGACGTATGCAGGGAAGAGGCAGCCTGCCCTTTTTGTCATCGACATAACTAGTGGAGAGGTACAGGCCGTCAAAGGAATTGACAAGTCTTTGAGTGTTGGACAAGTTGTATGGGCTCCAGCAATCGAAGGCTCTATGCAATATTTGGTCTTTGTTGGATGGTCATTTGAGACAAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCATGTGCAATATATGCTGTTAAAGCACCACACCATGAGTCAAAAGCAAATGAAACTGAGACGTACTCAACTGAAGATGTTCAAGCTGTTAACCTAACTCAAACCTTAAGCAGTGCTTTCTTTCCACGGTTCAGCCCAGATGGAAAGTTTCTTGTATTTGTATCTGCAAGAAGCTCAGTTGATTCTGGCGCCCATTCTGCTACAGATTCACTTCATAGAATGGATTGGCCTGAGGATACGAAGCTTTATCAATCTTCTAAAATTCATGAAGTGATTCCAGTTGTGTTTTGCGAGGATGGCAGCTTCCCAGGGCTTTACTGTTCAAATATCCTCAGTGATCCATGGCTTATCGATGGCCAGACCTTAGTTATAGCTTCTGTATGGCACAGCAATCAAGTTTTACTTTCCATCAATGTGCTGAGTGGAGAAATATTGCGAATCACCCCTGATAACTCAAATTTCTCTTGGAGTCTTCTTACATTGGATGGGAACAATATTCTTGCTGTTTCTAGCAGTCCAGTAGACGTTCCTCAAATCAAGTACGGAGCTATTGTTAAAAATACAACTAATGATAAAGAATGGAGTTGGTCAGATGTCTCAAATCCCATATTTAAGTGCTCAAACAAGGTTTGGTCATCGGTCTCGTCTCTTACATCCAATATAATGAAGATCTCAGTCAAGGAGCTTCCGAAGCTTAACAAAGGTGCTAGTCAACCTTATGAAGCTATATTTGTGTCATCAAAAACTAAGAAAAGTGCATGTGATCCACTAATTGTGATCCTTCATGGGGGACCACCTGTCTTATTGTCAAGCTTTTCAAGGCCATTGGCTTATCTTTCTTCGGTTGGATATACTTACTTGATAATATTTCTCAGAGGCTCAGTAGGATTTGGCGAGGAAGCCTTGCAATCTCTTCCAGGAAAAGTTGGCTCTCAGGATGTCAACGATGTGCTCACTGCTATTGATCATGTCATTGATTTGGGACTCGCCAGTCCTTCAAAGATTGCAGTTCTTGGTGGCTCACATGGTGGCTTTCTAACAACCCACTTGATTGGCCAGGCACCTGAGAAATTTGTTGCAGCCGCTGCATGGAATCCTGTGTGTAACCTTGCACTGATGGTTGGTACAACCGATATCCCTGATTGGTGCTATGTGGAGACTTATGGAACCGAGGGTAGAGACAAGTTTACTGAAGCACCTTCAGCAGCGGATCTAACTCTATTTTATAGCAAATCTCCTATTTCACACCTCTCAAAGGCAAAAACACCAACGCTTTTTCTACTTGGTGCCCAAGATCTCCGTGTTCCAATTTCGACTGGACTACAATATGCTCGGGCTTTAAGGGAGAAAGGAGTACCAACAAAAGTCATCGTGTTTCCAAATGATGTTCATGGAATTGAAAGACCACAGTCCGACTTTGAGAGCTACCTTAACATTGCGATCTGGTTCAACAAGTATTGCAAATGA 2454 0.4482 MFGRTPSVCNWCGRVAPSLFFPLYLPNLNRNPICSLSTLITPTPTTLPLTARRFSFSPLSPMEDENQATEQEYAFHSDLLHQFTAIPSVDKAWLFNPHAGLASQAMFCVSQPNLLTNKRKKSILSASLLRQSDGTVAFHWAPFPIELSGVSAMVPSPSASKLLIVRNPENEGPCRFEIWSSSQLEKEFHVPQSKHGSVYTDGWFEGISWNLNETCIAYAAEEPAPAKPTFNDLGGYQKRSSSDKDGGTWKAQGEWEEEWGETYAGKRQPALFVIDITSGEVQAVKGIDKSLSVGQVVWAPAIEGSMQYLVFVGWSFETRKLGIKYCYNRPCAIYAVKAPHHESKANETETYSTEDVQAVNLTQTLSSAFFPRFSPDGKFLVFVSARSSVDSGAHSATDSLHRMDWPEDTKLYQSSKIHEVIPVVLXCEDGSFPGLYCSNILSDPWLIDGQTLVIASVWHSNQVLLSINVLSGEILRITPDNSNFSWSLLTLDGNNILAVSSSPVDVPQIKYGAIVKNTTNDKEWSWSDVSNPIFKCSNKVWSSVSSLTSNIMKISVKELPKLNKGASQPYEAIFVSSKTKKSDXCDPLIVILHGGPHXVLLSSFSRPLAYLSSVGYTYLIIFLRGSVGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAAWNPVCNLALMVGTTDIPDWCYVETYGTEGRDKFTEAPSAADLTLFYSKSPISHLSKAKTPTLFLLGAQDLRVPISTGLQYARALREKGVPTKVIVFPNDVHGIERPQSDFESYLNIAIWFNKYCK 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13174g00009 820 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 66 819 - -
Vium13174g00009 820 ProSitePatterns Prolyl endopeptidase family serine active site. 648 678 IPR002471 GO:0004252|GO:0006508
Vium13174g00009 820 FunFam Acylamino-acid-releasing enzyme 560 819 - -
Vium13174g00009 820 Pfam WD40-like Beta Propeller Repeat 361 391 IPR011659 -
Vium13174g00009 820 SUPERFAMILY alpha/beta-Hydrolases 582 819 IPR029058 -
Vium13174g00009 820 MobiDBLite consensus disorder prediction 229 251 - -
Vium13174g00009 820 Pfam Prolyl oligopeptidase family 603 819 IPR001375 GO:0006508|GO:0008236
Vium13174g00009 820 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 69 343 IPR045550 -
Vium13174g00009 820 Gene3D alpha/beta hydrolase 566 818 IPR029058 -
Vium13174g00009 820 SUPERFAMILY DPP6 N-terminal domain-like 146 507 - -
Vium13174g00009 820 Gene3D - 340 557 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13174g00009 Vium-Chr13174 45171 55708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13174g00009 587 803 Carbohydrate Esterase AT5G36210 24.424 3.46e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13174g00009 K01303 - gmx:100803600 1335.86