Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13174g00008 ATGCCACTGTTCATTCATGTTCTTCACTATATTATTTCTCATCTTTTATGTACCAAGGTGTTGATCCCCTGCTTGGAAATGCATAAGGAAGCTGAGGATGACTATGCCCACCTTTCTAGCTTACTTCAAGAGTTCACCAGTATTCCCAACATTGACAAGGCATGGCTTTTTAGCTCTCCAGGGTTGCACTTGCAAGGAATGTTTGCAGTTTCCCAATCAGATCTTTTAACAAACACGAGGAGGACATCCATCATGTCCTGTAACATTCTAAAAGAAAGGAACAGTTCTGTGAATTTTCTGTGGGCTCCGTTTCCAATAGAGATGTCTGGCGTGTCCGTGATTGTTCCATCACCATCTGGCTCAAAGCTCTTAGTGATTCGAAATCCAGAGAATGAAGCTGCTTGTTGTTTTCAGATTTGGAGCTCTTCTCGAATGGAGAAGGAGTTCCACATTCCTCAATCACTGCATGGCTCAGTATACAATGATGGATGGTTTGAGGGTGTCTCGTGGAACATGAATGAAACATGCGTAGCATACGTAGCAGAAGGGCCCTCTCCTGCAAAGCTCACATTTAATGGTTTGGGGGGCTACAAGATAGATGGCTGTGCAGATAAGGATTCAGGTTATTGGAAATGTCAAGGGGACTGGGAGGAGGACTGGGGAGAAACATATGCTGGAAAGAGACAGCCTGCACTATTTGTTATCGACATCAACAGTGGTGAGGTGCAAGAAGTCAAAGGAATTGACAAATCCTTGAGTATTGGCCAAGTTGTATGGGCTCCATTTACTGAAGGCTCAGAACAATACCTTGTTTTCGTTGGGTGGTCATCTAAGCCAAGAAAACTTGGCATTAAGTATTGCTCTAACAGACCTTGCGGATTATATGCTGTTAGACTTAGAGCACTGCATCATGATTCAAAATCTAATGAACCAGTGCTCCAGTCAACTGAAGAATTTCATGTGCTGAACCTTACTCAAACTATAAGCAGTGCATTCTTTCCACGGTTCAGTCCAGATGGAAAATTTCTTGTGTTTTTATCTGCAAGAAGTGCTGTGGACTCTGGAGTGCATAATGCTACAAATTCACTTCACAGAATTGATTGGCTAACTAATGGAAAACCTTTCCAATCTTCCAAAATTGACGACATCATTCCTGTTGTGATGTGCGCTGAAGACGGTTGCTTCCCTGGGCTTTATTGTACCACTATTCATAGTAATCCTTGGTTATCTGACAACTGCACAATGATTATATCATCCATCTGGCACAGCAGTGAAGTTCTGCTCTCAGTGAATTTGCTGAGTGGGGAGATAGTACATATCAGCCCTGTAGATCCAATTTTCTCGTGGAATCTTCTTACGCTGGATGGGAACAATATTGTTGCCATTTCCAGCAGTCCGGTTGATTTTGCTCAATTAAGGTATGGAAAGGCCATTAAGAAGGAGACAAACAATACTACATGGAGTTGGTCAAATATATCCAGTCCCATATTCAGATGCTCTGACAAGGTTAGATCTTTGCTGTCCTCTCTCCAGTCTTGTATACTGAGGATCTCAGTTAAGGATGCTCATGTTGGTCAAACAAAAGGTGCTACAAAACCTTTTGAAGCTATATTTGTGTCTTCTAAAACCAATACCAAGATTGAATTTGATCCGTTAATTGTGATCCTTCATGGAGGGCCCCAAGACGTCTCTTTGTCATACTTTTCTAAGTATTTGGCTTTTCTATCTACAGTTGGATACAGCTTGCTGATTGTAAATTACAGAGGTTCATTGGGATTTGGTGAGGAAGCATTGCAATCTCTTCCAGGGAATGTTGGGTCTCAGGATGTCAATGATGTTCTCTCTGCCATAGATCATGTCATCAACTTGGGTCTTGCCAGCCCATCTAAGATTACAGTAATGGGCATTTCACATGGTGGTTTTCTGACAACTCAGTTGATTGGCCAGGCACCAGACAAGTTTGTAGCAGCGGCTGCAATCAATCCTGTTTGTAACCTTGCACTGATGATTGGAACAACAGATATCCCTGATTGGTGCTATGTAGAAGCTTGTGGAACCACTGCCAGAAATTGCTTTACTGAACCACCTTCCGCAGATGATTTGACTCTCCTTTATAACAAGTCTCCCATTTCACACGTCTCAAAGGTAAAAGCACCAACACTATTCCTATTAGGTGCCCAAGATGTTCGTGTTCCAATGTATGATGGGTTGCAATATGCTCGGGCTTTGAAGGAGAAAGGTGTAGATGTCAAGATCATTATGTTTCAAAATGATGTTCATGCACTGAAAAGGCCACAATCTGACTTGGAATCTTTCCTTAACATTGGGGTGTGGTTCAACAAGTACTGCATATACGGGGCAAGCGAATCACGAGATTTCCTGAAGACCTAA 2391 0.4233 MPLFIHVLHYIISHLLCTKVLIPCLEMHKEAEDDYAHLSSLLQEFTSIPNIDKAWLFSSPGLHLQGMFAVSQSDLLTNTRRTSIMSCNILKERNSSVNFLWAPFPIEMSGVSVIVPSPSGSKLLVIRNPENEAACCFQIWSSSRMEKEFHIPQSLHGSVYNDGWFEGVSWNMNETCVAYVAEGPSPAKLTFNGLGGYKIDGCADKDSGYWKCQGDWEEDWGETYAGKRQPALFVIDINSGEVQEVKGIDKSLSIGQVVWAPFTEGSEQYLVFVGWSSKPRKLGIKYCSNRPCGLYAVRLRALHHDSKSNEPVLQSTEEFHVLNLTQTISSAFFPRFSPDGKFLVFLSARSAVDSGVHNATNSLHRIDWLTNGKPFQSSKIDDIIPVVMCAEDGCFPGLYCTTIHSNPWLSDNCTMIISSIWHSSEVLLSVNLLSGEIVHISPVDPIFSWNLLTLDGNNIVAISSSPVDFAQLRYGKAIKKETNNTTWSWSNISSPIFRCSDKVRSLLSSLQSCILRISVKDAHVGQTKGATKPFEAIFVSSKTNTKIEFDPLIVILHGGPQDVSLSYFSKYLAFLSTVGYSLLIVNYRGSLGFGEEALQSLPGNVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLTTQLIGQAPDKFVAAAAINPVCNLALMIGTTDIPDWCYVEACGTTARNCFTEPPSADDLTLLYNKSPISHVSKVKAPTLFLLGAQDVRVPMYDGLQYARALKEKGVDVKIIMFQNDVHALKRPQSDLESFLNIGVWFNKYCIYGASESRDFLKT 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13174g00008 796 Pfam Prolyl oligopeptidase family 568 782 IPR001375 GO:0006508|GO:0008236
Vium13174g00008 796 SUPERFAMILY alpha/beta-Hydrolases 551 782 IPR029058 -
Vium13174g00008 796 ProSitePatterns Prolyl endopeptidase family serine active site. 612 642 IPR002471 GO:0004252|GO:0006508
Vium13174g00008 796 SUPERFAMILY DPP6 N-terminal domain-like 109 467 - -
Vium13174g00008 796 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 31 783 - -
Vium13174g00008 796 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 32 300 IPR045550 -
Vium13174g00008 796 Gene3D alpha/beta hydrolase 530 782 IPR029058 -
Vium13174g00008 796 FunFam Acylamino-acid-releasing enzyme 523 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13174g00008 Vium-Chr13174 35657 44672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13174g00008 548 767 Carbohydrate Esterase AT5G36210 25.000 5.46e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13174g00008 K01303 - gmx:100812681 1348.18