Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13080g00001 ATGACCAAGCGAACCAAGAAGGCCGGTATTGTTGGAAAATACGGCACCCGATATGGTGCTAGTTTAAGGAAGCAAATTAAGAAGATGGAAGTTAGTCAGCACAGTAAATTTTTCTGTGAGTTCTGTGGAAAGTACGCTGTTAAGAGGAAGGCTGTTGGCATTTGGGGATGCAAAGACTGTGGAAAAGTGAAGGCTGGAGGTGCTTACACATTGAATACTGCCAGTGCCGTGACTGTCCGAAGCACCATTCGAAGGTTGAGGGAGCAGACCGAGAGTTAA 279 0.4624 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13080g00001 92 FunFam 60S ribosomal protein L37a 2 92 - -
Vium13080g00001 92 Pfam Ribosomal L37ae protein family 4 88 IPR002674 GO:0003735|GO:0005840|GO:0006412
Vium13080g00001 92 NCBIfam ribosomal protein eL43 1 91 IPR002674 GO:0003735|GO:0005840|GO:0006412
Vium13080g00001 92 Gene3D - 1 92 IPR011331 GO:0003735|GO:0005840|GO:0006412
Vium13080g00001 92 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 4 72 IPR002674 GO:0003735|GO:0005840|GO:0006412
Vium13080g00001 92 PANTHER ZGC:171772 1 92 - -
Vium13080g00001 92 SUPERFAMILY Zn-binding ribosomal proteins 10 82 IPR011332 GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13080g00001 1 92 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 93.478 7.82e-60 176