Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium13031g00007 ATGGCTCCCTCAGATCAATCTCGCCACTCTCTTGTTCCTGAATTCTTATACTCATCAAAAATACAGTCCCATTTGAGTAATAACACCAATCATGGGTTGCCATTGCTACCATCATCATCCTCCATTGCATCGCATTCATCATCCTCATCGTTACCAGCGCAGGGTGGGGCCAAGAGTCCCGTGATCCTTTCACCAAAAGAGAAAATCCGCATGTTTTCTCCTGCCTACTATGCAGCATGCAGTGCCGGTGGGGTCTTCAGTTGTGGACTCACCCACATGGCTGTCACTCCTCTCGATCTTGTCAAGTGCAACATGCAGATTGATCCTGTAAAGTACAAGAACATCACATCGGGATTTGGAGTGTTACTGAAGGAACAGGGTGCTAAAGGTTTCTTCAGGGGATGGGTGCCTACTCTGCTGGGGTACAGTGCTCAAGGAGCATGCAAGTTTGGGTTTTATGAATTCTTCAAGAAGTATTACTCAGACCTTGCAGGACCCGAGAATGCAGTGAAGTACAAAACGATCATATATCTAGCCGGTTCTGCTTCAGCTGAAGTTATTGCTGATATTGCCCTTTGCCCTATGGAGGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTCGAGGTTTATCAGATGGGTTGCCCAAGTTTATCAAGGCCGACGGTGTTTCTGGGTTGTATAAAGGTATAGTTCCTCTTTGGGGGCGTCAAATTCCATACACGATGATGAAATTTGCTTCCTTTGAGACCGTTGTGGAGATGATCTACAAAAACGTCATCCCAGTCCCAAAGGAGAAGTGCAGCAAAAATAAGCAGCTTGGAGTGAGTTTTGCAGCTGGATACATAGCAGGTGTGCTCTGTGCAGTTGTCTCACATCCTGCCGACAACCTCGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTATTGGTGATGCTGTGAAGAAAATTGGGGTAGTAGGTCTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTAACCGGAGCACAGTGGGGACTCTATGATTCATTTAAAGTATTTGTAGGACTGCCTACTACTGGAGGAAGTGCTCCTGCACCTGTTAAGTAG 1104 0.4638 MAPSDQSRHSLVPEFLYSSKIQSHLSNNTNHGLPLLPSSSSIASHSSSSSLPAQGGAKSPVILSPKEKIRMFSPAYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPVKYKNITSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTIIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKADGVSGLYKGIVPLWGRQIPYTMMKFASFETVVEMIYKNVIPVPKEKCSKNKQLGVSFAAGYIAGVLCAVVSHPADNLVSFLNNAKGATIGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPAPVK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium13031g00007 367 FunFam Phosphate carrier protein, mitochondrial 75 353 - -
Vium13031g00007 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Vium13031g00007 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
Vium13031g00007 367 Gene3D Mitochondrial carrier domain 76 353 IPR023395 -
Vium13031g00007 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Vium13031g00007 367 Pfam Mitochondrial carrier protein 177 260 IPR018108 -
Vium13031g00007 367 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Vium13031g00007 367 SUPERFAMILY Mitochondrial carrier 76 347 IPR023395 -
Vium13031g00007 367 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 49 363 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium13031g00007 Vium-Chr13031 13372 16433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium13031g00007 5 365 Chloroplast and Mitochondria Gene Families AT5G14040 73.315 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium13031g00007 K15102 - gmx:100800530 636.721