Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1302g00015 ATGGGAGGGGAGAGCAACAAGGTCTTCACTTTGGCTGAGGTTTCTCAGCACAATAATGCCAAAGATTGTTGGCTTGTCATTCATGGCAAGGTTTATAATGTGACGAAGTTCTTGGAGGACCACCCTGGTGGTGATGATGTCCTCTTGTCTTCCACAGGGAAGGATGCAAGTAATGATTTTGATGATATTGGTCACAGCACCAGTGCCGTAGCCATGATGGATGAGTTCTATGTTGGAGACATTGATACATCATCCATCCCCAGCAAGGTGGCGTACACTCCTCCCAACCAACCTAAGTATAACCAGGACAAGACACCAGAGTTCATCATCAGGATCCTCCAGTTTCTAGTTCCCTTGCTTATCTTGGGTTTGGCAGTTGGTATTCATTTCTACACCAAATCAAAATAA 408 0.451 MGGESNKVFTLAEVSQHNNAKDCWLVIHGKVYNVTKFLEDHPGGDDVLLSSTGKDASNDFDDIGHSTSAVAMMDEFYVGDIDTSSIPSKVAYTPPNQPKYNQDKTPEFIIRILQFLVPLLILGLAVGIHFYTKSK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1302g00015 135 PRINTS Cytochrome B5 signature 69 81 IPR001199 -
Vium1302g00015 135 PRINTS Cytochrome B5 signature 41 55 IPR001199 -
Vium1302g00015 135 PRINTS Cytochrome B5 signature 56 63 IPR001199 -
Vium1302g00015 135 PRINTS Cytochrome B5 signature 31 41 IPR001199 -
Vium1302g00015 135 SMART Cyt_b5_2 9 82 IPR001199 -
Vium1302g00015 135 FunFam Cytochrome b5 type B 3 86 - -
Vium1302g00015 135 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 37 44 IPR018506 GO:0020037
Vium1302g00015 135 Gene3D - 3 86 IPR036400 -
Vium1302g00015 135 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 6 82 IPR001199 -
Vium1302g00015 135 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 81 IPR001199 -
Vium1302g00015 135 PANTHER CYTOCHROME B5 4 133 - -
Vium1302g00015 135 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 89 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1302g00015 Vium-Chr1302 142775 145770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1302g00015 1 135 NADPH P450 reductases AT5G48810 65.693 4.01e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1302g00015 K23490 - gmx:100500611 258.07