Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1302g00007 ATGTTGAAACTCACTGGAGATTCTGGGTACGTTTCTAAGAAATTGAGATGGATCAGTTTGCGAGGGTTTCCTTCAGAATACCTACGTAACAATTTTTATCTCCATGATGCAATAGCAATTGATTTAAAACACAGTCTTCTTCGATTCGTCTGGAAACAACCCCAGGTTTTGCTTTGGCTAAAAGTTCTTAATCTTAGTCACTCCAAGTACTTGACAAAAACCCCTGACTTTATCGGACTACCACGTCTTGAACAACTCATTCTCAAAGATTGTCCACGTTTGAACGAAGTACACCAATCTATTGGATGTCTTTGCTATCTTACACTGCTAAATTTAAAGGACTGTACAAGGCTAAGCAATCTCCCAAAAGAGATATATGAGTTGACAACTTTGCAAACTCTCATTCTTTCTGGTTGTTCGAAAATTGACCTATTGAAAAAAGATATAATGCAAATGGAATCCTTGGTAACTCTAATTGCTGAAAATACAGTTGTGAAACAATTGCCTTTTTCAATGGTAAGTTCAAAAAGCATTGGATATATATCTTTATGTGGACTTGAGGGATTGTCACATAATCTCTTTCCTTCTATCATTCGGTCTTGGATGTCATCAACAATGAATAAGCTGTCTTATAAACATTCGTTTTGCATGGATATGGAAGATAATAGTTGGGATGATTTTGTGCCATTTCTTAGCAGTCTTGCAAATCTTCGAAGTGTTTTGGTGCAATGTGATACCGAATTTCAACTATCTAAGCAAGTAGAAACTATTTTGATTGAATATGGAGCAAATATTACAGAATCAGGAACTTCAAAGCAGCACTTCAAGTCTTCTTTGATTGGTGTTGGTAGATGCAAAGATTTCTTCAATGCTGTCAGTGATAGAATTTCTGAGGTATTTGCAAGCAGTGAGTCATGTGATATTTCTCTTCCAAGTGACAATGATCCTTATTGGTTGGCGCATAGAGGTGAAGGACATTCTGTTTCTTTCNTTTAG 996 0.3624 MLKLTGDSGYVSKKLRWISLRGFPSEYLRNNFYLHDAIAIDLKHSLLRFVWKQPQVLLWLKVLNLSHSKYLTKTPDFIGLPRLEQLILKDCPRLNEVHQSIGCLCYLTLLNLKDCTRLSNLPKEIYELTTLQTLILSGCSKIDLLKKDIMQMESLVTLIAENTVVKQLPFSMVSSKSIGYISLCGLEGLSHNLFPSIIRSWMSSTMNKLSYKHSFCMDMEDNSWDDFVPFLSSLANLRSVLVQCDTEFQLSKQVETILIEYGANITESGTSKQHFKSSLIGVGRCKDFFNAVSDRISEVFASSESCDISLPSDNDPYWLAHRGEGHSVSFX 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1302g00007 331 SUPERFAMILY L domain-like 11 238 - -
Vium1302g00007 331 Gene3D Ribonuclease Inhibitor 10 265 IPR032675 -
Vium1302g00007 331 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 52 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1302g00007 Vium-Chr1302 29063 30473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1302g00007 60 172 WRKY Transcription Factor Family AT4G12020 34.513 6.90e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1302g00007 - - vum:124825769 666.766