Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12956g00001 ATGGACAAGCCCTTTATCCTCAGAATCTCAGAACTTGCAATCCTCGTTTTGTTCGCTTCAGTTTGCTTAACAATGTCGGATTCCGCCGCCACACCGCTGGACCAGCACGCCACCGGTTCTTCCCCTGCACCGGCGGTTCACATCATCTACACCGAGAGGCCACAGGATGAGGAGCCTGAGGCTTACCACATCCGAACCCTCTCCGCCGTTCTTGGCAGCGAGGAGGCTGCCAAGGAAGCTTTGTTGTACAGTTACAAATCTGCAGCTAGTGGGTTTTCTGCTAAGCTTACTCCGGAGCAGGTTGAACAGATTTCAAAGCAACCAGGTGTTCTTCAAGTTGTTCCGAGCAGGACATATCAGCTGCATGGAGCAAATAATCTGCAGTAA 387 0.5168 MDKPFILRISELAILVLFASVCLTMSDSAATPLDQHATGSSPAPAVHIIYTERPQDEEPEAYHIRTLSAVLGSEEAAKEALLYSYKSAASGFSAKLTPEQVEQISKQPGVLQVVPSRTYQLHGANNLQ 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12956g00001 128 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 122 IPR037045 -
Vium12956g00001 128 Pfam Peptidase inhibitor I9 48 122 IPR010259 -
Vium12956g00001 128 PANTHER PROTEINASE INHIBITOR, PROPEPTIDE 12 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium12956g00001 Vium-Chr12956 6417 9076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12956g00001 46 122 Subtilisin-like Serine Gene Family AT5G11940 42.500 3.02e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12956g00001 - - gmx:100777195 200.675