Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12949g00001 ATGTCTAGTGATATTGCAATTGCGCAGTTCAAGTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGGAGGATGTCACCAATGATATGCTATTTTTTCTATAAGAACATCACATTTGGATTCACCCTATTCTTGTATGAGGTGTATGCATCATTCTCTGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATTGTGTCTTCTTTTCGTCACTTCCTGTAATTGCCCTTGGGGTCCTTGACCAGGATGTATCTGCCAGGTACTGCCTGAAGGTAAATTGTGTTTATCATCTAAGAATGTTTGTTTCAAATTCTCAAGCCCTTCAAATGGCCATTTCCAAAATGGAGAAGGAAACTGGAAGAACAGCCGGAAGGGATATGCTGGGCGTGAGAATGTATACTTGCATGGTTTGGGTGGTGAACTTGCAGATGGCACTTGCTATACGTTATTTCACCTTGATCCAACATATTTTTATCTGGGGTTCCATTGCATTCTGGTATCTTTTCCTTCTGGCATATGGAGCAATGCCTCCAAAATTTTCTACAAATGTTTATCAAGTCTTCATTGAAACTCTCGCCACATCTCCTTCCTTTTGG 609 0.4056 MSSDIAIAQFKYLERLLLVHGHWCYRRMSPMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYCVFFSSLPVIALGVLDQDVSARYCLKVNCVYHLRMFVSNSQALQMAISKMEKETGRTAGRDMLGVRMYTCMVWVVNLQMALAIRYFTLIQHIFIWGSIAFWYLFLLAYGAMPPKFSTNVYQVFIETLATSPSFW 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12949g00001 203 Pfam Phospholipid-translocating P-type ATPase C-terminal 1 203 IPR032630 -
Vium12949g00001 203 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 203 - -
Vium12949g00001 203 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 203 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium12949g00001 Vium-Chr12949 9 1265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12949g00001 1 203 Primary Pumps ATPases AT1G13210 64.286 3.04e-91 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12949g00001 K01530 - vum:124821734 423.32