Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12932g00001 ATGAGAACTACAGATAAAAGACTTGGAGGAAGAAGTCTTGTGGGATGGGCAAGGCCACTTTTAAAAGAGAGGAACTATCCAGATTTAATTGATGAAAGGATCATTAAGGCTCATGATGTTCATCAACTATTTTGGATGGTTCGAATAGCTGAGAAATGTCTAAGCAGAGAGCCTCAAAGGAGACTAAATATGATTCAGGTTGTTGATGCTTTGACTGACATTGTGGAAGGCAGAACATGTGACAGCATCGTAAGAGATTACTCCCCAGCAAGGTCAGATTCGATTTATAGTGCATCAGAGTCTGACGAATCTGAAGATGAAATGAAGGAATCCTTCAAGTGCGAAGATGAATCACCAACTCGCAGTTCAGAATTCATAGATAGTAATAGCACATGTCAGATGATGCACATGAATTTAAGACAGCCACCATCTCCTCCAATTCAGAGCGTCTCTCTAAGTAGCTCAAGCTCGCATTATTCTCATGATGAGTCAACTAGTGATGGTGAAGCATTACAAATATCAAAATCCAATGAGGGTAGCTCAATTTTTAGATGCTAG 558 0.3996 MRTTDKRLGGRSLVGWARPLLKERNYPDLIDERIIKAHDVHQLFWMVRIAEKCLSREPQRRLNMIQVVDALTDIVEGRTCDSIVRDYSPARSDSIYSASESDESEDEMKESFKCEDESPTRSSEFIDSNSTCQMMHMNLRQPPSPPIQSVSLSSSSSHYSHDESTSDGEALQISKSNEGSSIFRC 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12932g00001 185 MobiDBLite consensus disorder prediction 106 122 - -
Vium12932g00001 185 MobiDBLite consensus disorder prediction 92 185 - -
Vium12932g00001 185 MobiDBLite consensus disorder prediction 123 185 - -
Vium12932g00001 185 SUPERFAMILY Protein kinase-like (PK-like) 11 89 IPR011009 -
Vium12932g00001 185 Gene3D Transferase(Phosphotransferase) domain 1 2 90 - -
Vium12932g00001 185 PANTHER OS01G0253100 PROTEIN 10 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium12932g00001 Vium-Chr12932 1895 3266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12932g00001 4 127 Trihelix Transcription Factor Family AT5G38560 31.250 1.36e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12932g00001 - - vum:124821724 321.627