Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12764g00012 ATGGAGAAAATGAGAGAGAATATTTCAGAAACTTGGCTAGTTTTGATCTCAGTGATATTGGTCACGGCCATATTTGCAAAAATAATTCTATTCAAGTTAGGGAAGGAAGATAAAAGAAAATGCAGATTACCACCAGGAAGGAGAGGGTGGCCTTTGATTGGAGACAGCATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGGTGAAGAGGTATGGTAAGATATTTTCATGCAGCCTATTTGGCAAATGGGCAGTGGTGTCAGCAGATCCAAGCTTCAACCGCTTTGTAATGCAGAATGAAGGAAGATTATTCATTTCCAGCTACCCAAAATCTTTCAGAGATTTGGTCGGAAAAAATGGTGTGATCACAGTGCAAGGAGAGCAACAAAGGAAGCTACATGGAATTGCCTCCAATATGATGCGTCTGGAGAAGCTTAAGTTCCACTTCTTGAATGATATCCAAAAGGTCATGGTCCAAACTTTGGGCAATTTTAACAACAACCAAGTCATTCTTCTCCAAGATGTTTGTAGGAAAGTGGCTATACATTTAATGGTTAATCAACTATTGGGGGTTTCAAGTGAGTCTCAAGTCAATGAAATGGCTCAGTTGTTTTCTGACTTTGTTGATGGTTGTTTATCCATTCCAATCAACATCCCTGGATATGCATACCACACTGCTATGAAGGCAAGGGAGAATATCATAAGCAAGATAAACAAGATCATTGAGGAACACAGACAAAAGGGTGCTCCAATGGAAGGCAGTGGTGTACTTGGAAGATTGCTAGAGGAAGAAAGCTTGCCAGATGATGCTGTTGCGGACTTCATTATCAATCTTCTCTTTGCCGGAAATGAAACAACAACCAAAACAATGCTCTTTGCAGTCTATTTCCTTACTCAATGTCCAAGAGCCATGAAGCAGTTGCTGGATGAACATGGTTCACTGAGGAGTCATTCTGGAGATGAATTGCTCACATGGCAGGACTACAAAGCAATGTCATTCACTCAATGCGTCATTGATGAAACACTGAGACTTGGGGGCATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGATGTTCAATACCAAGATTTCATTATTCCCAAAGGGTGCTTTGTGGTTCCATTTCTTTCAGCAGTCCATTTAGATGAGAAAATATACAGTGGAGCTCTAGACTTCAATCCTTGGAGATGGATGGAACATGAAAATGAGGAAAAGAGAAACTGGAGAAGTAGTTCATTCTATGCACCATTTGGTGGAGGTGCCAGATTCTGTCCAGGAGCAGAGCTGGCACGCCTTCAAATTGCTCTTTTTCTTCATTACTTTGTTACTACATACAGATGGACACAGATGAAGGAAGATAGGATGTCCTTCTTTCCCTCTGCTCGTTTGGTGAATGGTTTTGAAATCTGTCTAACAAGAAGACAGGATGAGACAGATTAA 1464 0.4064 MEKMRENISETWLVLISVILVTAIFAKIILFKLGKEDKRKCRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVKRYGKIFSCSLFGKWAVVSADPSFNRFVMQNEGRLFISSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKVMVQTLGNFNNNQVILLQDVCRKVAIHLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSIPINIPGYAYHTAMKARENIISKINKIIEEHRQKGAPMEGSGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPRAMKQLLDEHGSLRSHSGDELLTWQDYKAMSFTQCVIDETLRLGGIAIWLMREAKEDVQYQDFIIPKGCFVVPFLSAVHLDEKIYSGALDFNPWRWMEHENEEKRNWRSSSFYAPFGGGARFCPGAELARLQIALFLHYFVTTYRWTQMKEDRMSFFPSARLVNGFEICLTRRQDETD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12764g00012 487 CDD CYP90-like 76 481 - -
Vium12764g00012 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Vium12764g00012 487 Pfam Cytochrome P450 44 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 PANTHER CYTOCHROME P450 26 40 458 - -
Vium12764g00012 487 PRINTS E-class P450 group IV signature 432 450 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 PRINTS E-class P450 group IV signature 70 93 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 PRINTS E-class P450 group IV signature 416 432 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 PRINTS E-class P450 group IV signature 280 306 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 PRINTS E-class P450 group IV signature 339 355 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 FunFam Cytochrome P450 720B1 family 33 482 - -
Vium12764g00012 487 Gene3D Cytochrome P450 33 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium12764g00012 487 SUPERFAMILY Cytochrome P450 39 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium12764g00012 Vium-Chr12764 61259 66144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12764g00012 4 485 Cytochrome P450 AT1G73340 70.902 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12764g00012 - - gmx:100806921 900.582