Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12699g00001 ATGGCTCTGCCTCATAAGTCTCTACAGATGCCAGACTCTGTGCTGGTCTTCTTTCCCTACGAGGACGTTGTGGAGGAACTGGCTGAGCTGCCTCCTCTCCTCCACAATATTGTCTATAATAGGCTTCATCAATGGATTTCCTCGGCCTCTCCAATGGCGGAGCAGAAGTATCCACCCCAGCTATCTTGCACAGTGTTTTGTGTTTCAGAGAAATTGAGATGGCCTGTTCTGGTGATAGCCATTCTTGCTGCAGTTGTGGGAAGCCAATCCATCATCACTGGAACTTTCTCAATCATCAGGCAATGCTCTGCATTGAGTTGCTTCCCTAGAGTAAAAGTGGTTCACACTTCATCCAAAATCCATGGACAAGTATATATCCCTGAGATCAATTGGTTGTTGATGCTCTTGTGTTTGGCTGTAACTGTTGGCTTCAGAGACACAAAGCTTATGGGTAATGCATCAGGTTTGGCAGTTGTCTCAGTGATGCTAGTCACCTCTTGTTTGATGTCAGTGGTTATCGTAATCTGCTGGCACAAGAATGTTCTGCTTGCAGTTGGGTTTGTTCTCTTTTTTGGCTCCATTGAGGCTCTCTTCTTCTCAGCTTCTGTGATGAAGTTCTTTGAAGGAGCATGGGTGCCAGTTGCTTTGGCATTTGTGTTTCTTTCTGTGATGTGTGTGTGGCACTATGGCACTCTCAAAAAGTATGAATTTGATGTTCAAAACAAGGTTTCAATCAGCTGGTTACTCAGCCTTGGCCCTAGCTTAGGCTTTGCAAGAGTACGTGGGATTGGCCTTGTGCACACTGAACTAGTATCTGGAATTCCTGCTATTTTCTCCCACTTTGTGACCAACCTACCAGCATTCCACCAAGTCCTTGTTTTCCTATGCATCAAGCATGTGCCAGTTCCACATGTTAGAGGCGAGGAAAGGTTTCTAGTTGGTCGTGTAGGTCCGAGAGATTTCAGAATCTACAGGTGCATAGTGAGATATGGATACCATGATGTCCACAAAGATGATAATGAGTTTGAAAAAGACCTTGTGTGCAGCATAGCAAAGTTCATACAAGCAGGAAGTGGTGGATGCAACTCTTCAAATGATGAGGTTGAAAAGGGTGGAAACATGACAGTGGTTGGAAGCTGTTCTACTAGCCACTCCCTGTTGGTGAGTGAGAAAGATGAGGTTGATGTGGAGTTGGATGAGAGCTCAGAATCAGAGAAGGTGATGAAACGAAAGAAAAGGGTGAGATTCATTGTGCCTGAGAGTTCAAAGATTGATACTGCTGCAATAGAGGAGTTGAAAGAGCTTATGGAAGCTAGGGAAGTTGGAGTGGCCTACATTTTAGGACAGTCCTACATGAGAGTTAAAGCAGGGTCCAGCATGCTGAAGAAGTTGGTTATAAATTTTGGGTATGAATTCTTGAGGAAAAATAGCAGGGAGCCTTCCTCTCTACTTAGTGCTCCTCATGCATCATCTTTGGAAGTTGGGATGATGTATCATGTTTAA 1503 0.4444 MALPHKSLQMPDSVLVFFPYEDVVEELAELPPLLHNIVYNRLHQWISSASPMAEQKYPPQLSCTVFCVSEKLRWPVLVIAILAAVVGSQSIITGTFSIIRQCSALSCFPRVKVVHTSSKIHGQVYIPEINWLLMLLCLAVTVGFRDTKLMGNASGLAVVSVMLVTSCLMSVVIVICWHKNVLLAVGFVLFFGSIEALFFSASVMKFFEGAWVPVALAFVFLSVMCVWHYGTLKKYEFDVQNKVSISWLLSLGPSLGFARVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKHVPVPHVRGEERFLVGRVGPRDFRIYRCIVRYGYHDVHKDDNEFEKDLVCSIAKFIQAGSGGCNSSNDEVEKGGNMTVVGSCSTSHSLLVSEKDEVDVELDESSESEKVMKRKKRVRFIVPESSKIDTAAIEELKELMEAREVGVAYILGQSYMRVKAGSSMLKKLVINFGYEFLRKNSREPSSLLSAPHASSLEVGMMYHV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12699g00001 500 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 67 499 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium12699g00001 500 Pfam K+ potassium transporter 68 334 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium12699g00001 Vium-Chr12699 2890 4753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12699g00001 68 500 Inorganic Solute Cotransporters AT1G70300 67.038 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12699g00001 K03549 - gmx:100784861 737.258