Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1264g00019 ATGCCGTTGAACATAACATCCATCAAGACATCTTCTAATGGAGTGTGGCAAGGTGATAATCCTTTGGATTATGCCTTCCCACTCCTAATAGTTCAATTCACCTTAGTCCTCATCGTCACTCGCTCCCTCGCTTTACTTCTCAAACCTCTCCGACAACCCAAAGTCATTGCTGAGATTCTGGGTGGAGTTTTGCTGGGCCCATCGGTACTGGGAAGAAGCAAAAGTTATTTGCATCGTATATTCCCTTCATGGGGCACGCCAACGCTGGAATCTGTCGCAAGCATAGGTCTTCTTTTTTTCCTATTCCTCGTAGGTTTGGAGCTCGATCTCCATTCCATTCGTCGGAGCGGCAAAAGTGCCTTCAGCATCGCCGCCGTGGGGATCTCTCTTCCTTTCGTCTGCGGAATCGGCGTCGCCATCATCCTCCGCAAAACAGTTGAAGGCGCAGACGAACCCGGCTTCGCGCAGTTCATCGTCTTCATGGGCGTGGCGCTTTCCATCACCGCATTCCCGGTGCTGGCCCGCATCCTGGCAGAGCTCAAGCTCCTCACCACGCGAGTGGGGGAGACCGCGATGGCGGCGGCGGCGTTCAATGATGTGGTCGCGTGGATTCTGCTCGCGTTGGCAGTGGCTTTGGCGGGGAACGGCAGTGGGTCCCATAAGAGTCCTCTGGTATCGGTGTGGGTTCTTCTCTCGGGGCTGGCGTTCGTGGTTTTGATGATGGTGGCTGTCCGACCGGTGATGGAGGTTGTGGCTAGAAGGGGCGAAAACGACGCCGCTGACGAGTTTTATGTTTGTTTGACGCTAGCGGGGGTGTTGGTGTCGGGGTTTATGACGGACCTGATCGGGATTCACTCCATATTCGGGGCCTTCGTGTTCGGGCTAACGATTCCGAAGGAGGGAAACTTCGCGAAGAAGCTAACAGAGAGAATCGAGGATTTTGTTTTAGGTTTGTTGCTCCCACTCTACTTTGCTTCTAGCGGTTTGAAAACCGATGTAACTACCATACGTGGCGCTTCAGCGTGGGGTCTTCTGGTTCTGGTCATAGCCACGGCTTGTGCTGGGAAGATTCTTGGGACCTTCGTGGTAGCCATGTTCTGCATGATCCCCGCCAGAGAATCGCTCACACTTGGCGTCCTCATGAACACCAAAGGTCTTGTTGAGCTTATCGTACTCAACATTGGAAAGGAAAAAAAGGTTTTAAATGATGAAATGTTTGCAATCTTAGTTCTTATGGCTCTGTTCACCACCTTCATCACAACACCGATAGTAATGGCAATCTACAAACCAGCTCGAGGAAACTCAGTGAAAGCCCGGCGAAAGCTCGGTGACGATTCTTTGGGGTCTGGGAAGGAAATGGTTGAGAAGCTCAGAGTCTTGGCCTGTCTCCATGGGCCAAGCAATATCCCTTCTGTCATCAATTTGATTGAATCAACTCGAAGCACAAAAAAGTCCTTGATAAAGTTGTTCATGATGCACCTTGTTGAGCTCACAGAACGCTCATCCTCTATCATCATGGTTCATCGTGCTCGTAGAAATGGTTTCCCCTTCTTCAACCGCTCTCATCGTGACCAGTGGCATGACCGAATTGCAGGAGCCTTTCAAGCCTACACTCAACTAGGTCGAGTCACGGTTCGGTCCACAACTACTATTTCTTCTCTCTCCACCATGCACGAGGACATATGCCACGTGGCGGAGGAGAAAATGGTCACCATGATTATTTTGCCCTTCCACAAACAGTGGAGAACAGAAGTGAATGGGGACAACGAGAAATATCAAGTGGAAGAAAATGCAGGCCACGAATGGAGAGTGGTCAACCAAAAGGTACTTAAGAATGCACCTTGTTCAGTGGTCGTGCTTGTGGATCGTGGATATGGAAATTTGCCTGAAACTCCAATCCCAGATTCCATTGTTTATCAACGAGTGTGCATCATCTTCTTCGGTGGCCCCGATGATCGTGAGGCTCTAGAGTTGGGTAAGAAGATGCTTGAACACCCAACAGTTAAAATACGTGTTGTAAGGTTTATGGAAAAGGGTGTGTTGGATGATAATAACATTGTGTTAAACTTCTCACCTGACAAAAACAAAGACGATAGTTACAGCTTCTCCACTGCCAAAATAAATCGCCAGCAAGAAAAGGAGTTGGATGAGGAGGCAATTAAGCAGTTTCAAAGCAAGTTGAATGACATGGTGGAATACGTTGAGAAGTTTAGTGAGGACGTTGTGGAAGACGTATTGATAATAGGAAAAAGTGGGGATTATGATCTGATAATTGTTGGAAAAGGTCGATTCCCATCGAATATGGTGGCTGGTTTAGCAGAAAGAAAACCAGAACATGCTGAGTTAGGTCCTATTGGAGATGTTTTATCTTCATCAGAACATGAGGTTTTGTCATCTGTATTGGTTATTCAACAACACGATGTGACATTGGTAGATGATGCTCCTGTATGCAAGGTCCATGATGAGTATGGCACTGTCAATACTGCTTATTCTTCTCATGGAGTGGGAATTTCAATTGGCAATGACAATGCAGTGTAA 2538 0.4799 MPLNITSIKTSSNGVWQGDNPLDYAFPLLIVQFTLVLIVTRSLALLLKPLRQPKVIAEILGGVLLGPSVLGRSKSYLHRIFPSWGTPTLESVASIGLLFFLFLVGLELDLHSIRRSGKSAFSIAAVGISLPFVCGIGVAIILRKTVEGADEPGFAQFIVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVVAWILLALAVALAGNGSGSHKSPLVSVWVLLSGLAFVVLMMVAVRPVMEVVARRGENDAADEFYVCLTLAGVLVSGFMTDLIGIHSIFGAFVFGLTIPKEGNFAKKLTERIEDFVLGLLLPLYFASSGLKTDVTTIRGASAWGLLVLVIATACAGKILGTFVVAMFCMIPARESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPIVMAIYKPARGNSVKARRKLGDDSLGSGKEMVEKLRVLACLHGPSNIPSVINLIESTRSTKKSLIKLFMMHLVELTERSSSIIMVHRARRNGFPFFNRSHRDQWHDRIAGAFQAYTQLGRVTVRSTTTISSLSTMHEDICHVAEEKMVTMIILPFHKQWRTEVNGDNEKYQVEENAGHEWRVVNQKVLKNAPCSVVVLVDRGYGNLPETPIPDSIVYQRVCIIFFGGPDDREALELGKKMLEHPTVKIRVVRFMEKGVLDDNNIVLNFSPDKNKDDSYSFSTAKINRQQEKELDEEAIKQFQSKLNDMVEYVEKFSEDVVEDVLIIGKSGDYDLIIVGKGRFPSNMVAGLAERKPEHAELGPIGDVLSSSEHEVLSSVLVIQQHDVTLVDDAPVCKVHDEYGTVNTAYSSHGVGISIGNDNAV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1264g00019 845 PANTHER CATION/H + ANTIPORTER 8 807 - -
Vium1264g00019 845 Gene3D - 485 782 - -
Vium1264g00019 845 Gene3D - 28 435 IPR038770 -
Vium1264g00019 845 Pfam Sodium/hydrogen exchanger family 36 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium1264g00019 845 FunFam Cation/H(+) antiporter 15 28 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1264g00019 Vium-Chr1264 177100 181345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1264g00019 75 822 Antiporter Super Family AT3G53720 64.613 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1264g00019 K26731 - gmx:100798644 1264.21