Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1264g00001 ATGAATGGGGCGCAGAACAGGAAGGTTCACAATGTTGAGAAACCTTTTCCAGGATGTTTGGGAAGAATGGTGAACCTCTTTGATTTGACTGGGGGCGTCAATGGAAACAAGCTACTCACGGACAGGCCTCACCGCGATGCATCATCACTTTCAAGAAGTCAATCAGATGTTGCAAGGATCGCAAGTCCTACTTTGGGTGATCAGATAGAGGATAAGCTGATTGTTTCTGACTCAATGAGAGCTTTGTCAAATAAGAAAATAAATGGAACACCCATTAAGATGCTCATAGACCAAGAAATGTCCAAAGAAGTTGTTTCAAAGCACAACCCACCACCAAATGTAGTTGCAAAATTAATGGGGCTTGAAGCCCTCCCACGGGGAGATCCTAATTTATCTGTGGAGAGAAGCCATAGAGGAGATTATTCTCAACATACGTGTGATCATTCAGGGACACCATTTAAACACTGGCAGATGCATGATAGATTTATGGACAAGGAAATGCTTCATGAAGTTCATCTGAACACAGAACAGATTGCTTACAAGGATATTTATGACATATGGTTGCAATCACAAAGAACAGGCAATGTAAGAGACAAGACACCCGAGAGAGAAAAGTGGACTGAAGATGTTAATGGGAAGAAAATGGCTCTCATTCGTCAAAAATTTATGGAAGCTAAACGTCTGTCCACAGATGAGAAACTACGTCAGTCCAAGGAGTTTGATGATGCCTTGGAAGTTTTGAGTTCAAATAATGATCTGTTAATCAGGTTATTGGATTCTCAAAATCTTTATGAACTTCAGTCCACTCCAGTAGCAGAGACAAAGCGCATTACTGTTCTTAAGCCTTCGAAGATGGTTGATAATGAAAAATCTGTTGGTAAGGGGAAGAAAAATGATAAGCAGATTAGGAAACCGGCAAATGTTGGTACTGCATGGGAGAGATACAGTCCTGGATACACTCCTCCCAATCAGAAAGTGGACGAGTTTCCAGTACAACCTACTCGTATAGTGGTATTGAAGCCAAGCCCTGGCAAGGCACATGAGATTAAGGCAGTGGTTTCTCCAACAATGTCGTCACCTCGGAATTTGCCAAGTGGAAATTTCTACCAGGAACCTGAAGATGATGATGTACTTGAATCAAGAAAAGTAGATAGTGAGATTACACAGCAATTGCATGAAGATATGAGGAGCCATCAAAGAGATGAAACATTCTATTCTTCAGTATTTTCAAATGGCTATACTGGTGATGAGAGTTCATTCAACAAATCGGATCATGAGTGTAATGCAGGGAACTTTAGTGATTTGGAAGTCATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGTCCTTTTTCTTCATCATCCTTCAGCCGTGCATCCTGTTCTCCTGAGTCGTCGGTATGCAGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCATCAAGTAAAGGCCTTCAAGAACAAAGGCACATGCGCAGAAGCTCTACCTTAGGTGAGATGCTTGCTCTCTCGGATATAAAGAAATCTGAAATATCCGAGCTTGAGGGTATTAATAAAGAACAGGAACCAAATGAATCTGTTTCTTGTAGTCGAAATTTTAATGCTGAAACATGTGTGGATGGTTCTCCTAGAAATCTCTCTAGGTCAAAATCTGTTCCAACATCTTCCACTGTCTTTGATAATGGTCTCAGTGTTGAAGTTTGTGATAATGATGCTGGCAAAATACATGTGTCTGGGGAGCTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACCAGTTTCTTCTTCTCGAGGAGCAAGAAACCAACCAGAGAAAAATCTTGTCCATCTCAATCTAAAATTGAATCCCAATCTACACTCACTGGAACATCAGATTCTCCTGTAAGTTCGTCTGGTGTCCTTAGGGAGGATGTGTCTCAAAGCTTCAATAGTGGATCCATTGGAGAGTGTTCTCTTACAGTACCAAATGAATCATCAGGCAAAATGTTCTCAGATTCTATCTCTAACGGACAAGGCGCCATACCTCTGGAGTCTGGATTGACACTGTCAAAGCCCGTGGTGCCTGGGATTTCAAGTGAAAACCAGGGTCAGCCGAGTCCGATATCAGTTTTAGAGCCTCCATTTGAAGATGATAATGGTGCTAACGAGGCCTTGGGCTATGGGAAGGGTGGTCACCTGGGATCACGGGGCCCTCTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTCGGACCCTCTCTTGGGATGATTCTTGTGTAGAGGTGGCAAGTCCATACCCATTAAAGCCCTCGTTGGGCTCCTTAGACACCAAGGTAGAGGATCAAGACTGGCTTGTGTTTGTCGAGAAACTACTATCAGCTGCTGGAATTGATGATCAAGTGCAGTCTGACTCGTTTTACTCTAGATGGCATTCCCTCGAAAGCCCATTGGATCCATCATTGAGGGACAATTATGCCAATCTGAATGACAAGGAGCCTCAGCAACTCCATGAGGCGAAGCGAAGGCAGAGGAGATCCAATCAGAAGCTTGTATTCGATTGTGTTAATTTTTCACTGATAGAAATTACTGGTTATGGATCAGAGAATTACTTGATGGGTAGGTTATGGAGTGGGAGCCACAGCAGATTCCAAGTCCCAGAGGGTGAAGCTCACCCTTTGGTAGACCTTGTTGTGGCCCAGATGAAGGAGTTAATATCTGGTGCTATGAGGTCTGTTTGGGGAGATTGTGGGGACAGTAACAGCCTGGGGGTAGAAAGTGTTGTCAGAAAAGAGGTTGTGGGGAAAGGGTGGGTTGAGCTTATGGCATTAGAGATGGATATTTTGGTGAAGGAAGTAGAGGGGAAGTTGCTACAAGAACTTGTGGAGGATGCGGTAGTTGATTTGACTGGCAGGGCCTGA 2946 0.4321 MNGAQNRKVHNVEKPFPGCLGRMVNLFDLTGGVNGNKLLTDRPHRDASSLSRSQSDVARIASPTLGDQIEDKLIVSDSMRALSNKKINGTPIKMLIDQEMSKEVVSKHNPPPNVVAKLMGLEALPRGDPNLSVERSHRGDYSQHTCDHSGTPFKHWQMHDRFMDKEMLHEVHLNTEQIAYKDIYDIWLQSQRTGNVRDKTPEREKWTEDVNGKKMALIRQKFMEAKRLSTDEKLRQSKEFDDALEVLSSNNDLLIRLLDSQNLYELQSTPVAETKRITVLKPSKMVDNEKSVGKGKKNDKQIRKPANVGTAWERYSPGYTPPNQKVDEFPVQPTRIVVLKPSPGKAHEIKAVVSPTMSSPRNLPSGNFYQEPEDDDVLESRKVDSEITQQLHEDMRSHQRDETFYSSVFSNGYTGDESSFNKSDHECNAGNFSDLEVMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASSKGLQEQRHMRRSSTLGEMLALSDIKKSEISELEGINKEQEPNESVSCSRNFNAETCVDGSPRNLSRSKSVPTSSTVFDNGLSVEVCDNDAGKIHVSGELTKSKSMKSSFKGKVTSFFFSRSKKPTREKSCPSQSKIESQSTLTGTSDSPVSSSGVLREDVSQSFNSGSIGECSLTVPNESSGKMFSDSISNGQGAIPLESGLTLSKPVVPGISSENQGQPSPISVLEPPFEDDNGANEALGYGKGGHLGSRGPLKSNLIDKSPPIESIARTLSWDDSCVEVASPYPLKPSLGSLDTKVEDQDWLVFVEKLLSAAGIDDQVQSDSFYSRWHSLESPLDPSLRDNYANLNDKEPQQLHEAKRRQRRSNQKLVFDCVNFSLIEITGYGSENYLMGRLWSGSHSRFQVPEGEAHPLVDLVVAQMKELISGAMRSVWGDCGDSNSLGVESVVRKEVVGKGWVELMALEMDILVKEVEGKLLQELVEDAVVDLTGRA 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1264g00001 981 Pfam Domain of unknown function (DUF4378) 794 972 IPR025486 -
Vium1264g00001 981 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 980 - -
Vium1264g00001 981 MobiDBLite consensus disorder prediction 613 648 - -
Vium1264g00001 981 MobiDBLite consensus disorder prediction 621 648 - -
Vium1264g00001 981 Pfam Protein of unknown function (DUF3741) 219 262 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1264g00001 Vium-Chr1264 8764 14048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1264g00001 1 978 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 44.900 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1264g00001 - - gmx:100816611 1684.46