Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12631g00003 ATGGAGAACCGACACCACCGTGAATTGACCTTTTTAAGCTCCGGCGGCGACTTCCTCAATCCCCCTTTCGATCACACAACCCGCGACACCGATCCTCCCATCAAAGAAATGGACTTCTTCTCATCATCACCTTCATCTCCGGCTACTCATAAAACCAACAACACCAATCATATCAACCATGTTGGACTTCAAGATCACACTCATCCACAAGGATCACCCCCACACGTCTCTCATCACCCTGTAAACACCGGACTGAATTTAACTTGTGCAAGTACTGGACTCACAAAAGAAGAAAATGGTGAAAATCATGAAGCTGAGCTGAGTTCCATTGAAAGTCAATTGCGGAGACTACAGGAAGAGAATCGTAAGTTGAGAACTGTGCTGGACCAGATTACTAGAAGCTACACCCAACTCCAAGCTCAGTTATTCATCACTCTGCAGAAACAAAAGCTTCCTCAGGTGGATTTATTATCCATAGATTTTCTGCATTTAAATTTTCTACCTTAG 507 0.4398 MENRHHRELTFLSSGGDFLNPPFDHTTRDTDPPIKEMDFFSSSPSSPATHKTNNTNHINHVGLQDHTHPQGSPPHVSHHPVNTGLNLTCASTGLTKEENGENHEAELSSIESQLRRLQEENRKLRTVLDQITRSYTQLQAQLFITLQKQKLPQVDLLSIDFLHLNFLP 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12631g00003 168 MobiDBLite consensus disorder prediction 39 66 - -
Vium12631g00003 168 MobiDBLite consensus disorder prediction 1 78 - -
Vium12631g00003 168 Coils Coil 100 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium12631g00003 Vium-Chr12631 16904 17823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12631g00003 7 149 WRKY Transcription Factor Family AT4G01720 27.273 1.90e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12631g00003 - - vum:124821553 342.043