Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12537g00001 ATGGTGAGTGTATTCATTATGAGGCGCACCGGCCTTCCCGCCCGTGACCTCCGCATATTGGACCCTCTCCTCTCCTACCCTTCCACCCTTCTTGGCCGTGAGAGGGCCATCGTCATCAACTTGGAGCACATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCACGTGACCCCTCCGTCACCCCCTTCGTCCAAGAGCTCCAGGCTAGGATCCTCCGCCACCACCAGGCCTTCTCTTCCAAACATCACGACCACCACACCGACTCCGACCCCGACCACGACCACGTCCCTGATGCCATCAAGATTCTCCCTTTCGAATTCGTGGCCCTAGAGGCCTGCCTTGAAGCCGCCTGTAGCGTATTGGAGAACGAGGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACATCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTGGTCGCCATCACTGGCCGTGTTCAGAAGGTGAGGGATGAATTGGAGCACTTGCTGGACGACGACGATGATATGGCTGAGATGTATCTGACGGATAAGTTAGCCGAACAGCAGATGGAAGAGAGCTCTTCCGCATCCTCCATAAATGACCACGACGAGCAGGATATAGATGACAGGACCACTACAGAAATATATATATGTTAA 684 0.5439 MVSVFIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVQELQARILRHHQAFSSKHHDHHTDSDPDHDHVPDAIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTDKLAEQQMEESSSASSINDHDEQDIDDRTTTEIYIC 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12537g00001 227 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 214 IPR039204 -
Vium12537g00001 227 MobiDBLite consensus disorder prediction 196 221 - -
Vium12537g00001 227 Gene3D - 4 58 - -
Vium12537g00001 227 MobiDBLite consensus disorder prediction 206 220 - -
Vium12537g00001 227 CDD Mrs2_Mfm1p-like 6 213 IPR039204 -
Vium12537g00001 227 Gene3D Magnesium transport protein CorA, transmembrane region 61 218 - -
Vium12537g00001 227 Coils Coil 114 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium12537g00001 Vium-Chr12537 3367 4291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12537g00001 6 217 MRS2 Gene Family AT3G19640 67.917 9.63e-100 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12537g00001 - - gmx:100819578 296.589