Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12469g00007 ATGGATGTAGCTTTTAGGTTACCGCAGTCAAATGTGGTATTGGATGGTTTGGATTCTTGCACTGTATTTGGCGGGAGAGGTTTTTGTTGCGCTTTTCTCGGCAAGTCGAGGACTATTTCGAAGGCTCGTTTTAGTGGAACGAACAAGATAGGTAGTTGGAGTTGTTCGAGAGTAGACTGTTTCGGAGAGTTGAAAGTTTCGAGTGGGAAGAGGAGTATGTGTTGGAAGAGAAATAAACTTTTCAGGGGGAGTAGGAAAATTTGGACAAAGTGTCAGGGTAACGATTCTTTATCATATGTCAATGGCAATGGGCGGAATGTTGATAGGGTGGAAAGTGCGGATGAGGACTCTGGTTCCAGTGCTGAATCTTGTGAATCTTTGGGTGAAAATGGGCAAGAAGGGAGGAAAGAAGCTGGGGGTGAAGTAGCGGAGGATCAAAATGTGGATGAATTGAAAGAACAGCTGCAAAAGGCCAAGAAAGAATTAGAAGCCGCTCGAGAAAACAGCGTTGTATTTGAGGAAAAGGTTAAGAAGATATCAGAGACTGCGATTTTCTTGCAAGATGAAGCAGCAAGTGCTTGGAACAATGTTACTTCTACCCTTGATATCATCCAAGATATTGTGGGTCAAGAATTTGTTGCCAAAGAAGCTGTTCAGAAAGCAACTATGGCCCTTTCTCTGGCTGAGGCAAGGCTTCAAGTAGCCATAGAGTCTTACGAGGCTACAAAAGAAGCTTACGATTCCTCAGAAGGTTCTAACAACATTAATGATGATAAAGACATAATGCAGGAATCGAAGGAACTTTTGGATGCTCAGGAAGATATCAAGGAATGCCAGACAAATTTATCATATTGCGAGGATGAGCTGAGAGGCTTGCAATGTAGAAAGGAGGAGTTGCAGAGTGAAGTGAACAATTTGCATGAAGTTGCAGAACAGGAGCAGCTGAAAGCAGCAAAAGCAGATGAAGATGTTGCAAGCATAATGCTTTTAGCGGAAAAAGCTGTTGCTGCCGAAATTGATGCTGCACAACAGGTGAATGATGCAGAGATTGCATTACAGAAAGCAGAAAAAATTGCCTCTAGTCTTAAAGCTGATACCAAAGACAGTCTACAAGTACAAGAGATTGTAGCTATTCCCGAGGACGAGGAAGTGGGTCAAGGCTTTTCTGGTGATGATGTCGTTAAAAGGGAGGCTGATCTTTCAAATGATGATGAGCTTTTACTGACCGAAACAAAATCTGACAACAGTAGGCAAAGTTTGGAAGACATGGCACAGTCTGATTATCTGAGTGATCGAGAGAACGGACAATTAAGCTTAGACTCTTCTAAAGAAGCTGAAGTTGAAACAGAGAAGTCAAAGAATGTAGTTCAAACAAAAAAGCAGGAAACACAAAAAGATTTGACTAGAGATAATTCATCATTTTTTCCAAAGGCATTATTGAAGAAATCTTCCCGATTTTTTCCCGCATCATTCTTCTCTTTTACTGCCGATGAGACTGATTACACACCTGCATCAGTTTTCCATGGTCTTATGGAGTCTGCACAGAAGCAACTAGCCAAGCTAATTGTTGGGTTATTGCTAATTGGAGCAGGGCTTGTACTCTATAGCAATAGAGCCGAGAGGGGTGCTCAGCTGCTTCAGCAACCAGAAGTCATTGCAACCACTGTTGAAGAAGTTTCTTCAACTGCAAAGCCTCTGGTTAGAAGGCTTCAGGATCTTCCCAGGAGAATTAAGAAAATCATTGCATCATTACCTGATCAAGAGGTGGATGAGGAGGAAGCCTCCCTCTTTGACATGCTCTGGTTACTCCTTGCAAGTGTTGTATTTGTACCAATTTTTCAAAAGATTCCTGGAGGTAACTAG 1863 0.4214 MDVAFRLPQSNVVLDGLDSCTVFGGRGFCCAFLGKSRTISKARFSGTNKIGSWSCSRVDCFGELKVSSGKRSMCWKRNKLFRGSRKIWTKCQGNDSLSYVNGNGRNVDRVESADEDSGSSAESCESLGENGQEGRKEAGGEVAEDQNVDELKEQLQKAKKELEAARENSVVFEEKVKKISETAIFLQDEAASAWNNVTSTLDIIQDIVGQEFVAKEAVQKATMALSLAEARLQVAIESYEATKEAYDSSEGSNNINDDKDIMQESKELLDAQEDIKECQTNLSYCEDELRGLQCRKEELQSEVNNLHEVAEQEQLKAAKADEDVASIMLLAEKAVAAEIDAAQQVNDAEIALQKAEKIASSLKADTKDSLQVQEIVAIPEDEEVGQGFSGDDVVKREADLSNDDELLLTETKSDNSRQSLEDMAQSDYLSDRENGQLSLDSSKEAEVETEKSKNVVQTKKQETQKDLTRDNSSFFPKALLKKSSRFFPASFFSFTADETDYTPASVFHGLMESAQKQLAKLIVGLLLIGAGLVLYSNRAERGAQLLQQPEVIATTVEEVSSTAKPLVRRLQDLPRRIKKIIASLPDQEVDEEEASLFDMLWLLLASVVFVPIFQKIPGGN 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12469g00007 620 MobiDBLite consensus disorder prediction 418 436 - -
Vium12469g00007 620 MobiDBLite consensus disorder prediction 108 148 - -
Vium12469g00007 620 Coils Coil 261 316 - -
Vium12469g00007 620 Coils Coil 345 365 - -
Vium12469g00007 620 MobiDBLite consensus disorder prediction 410 464 - -
Vium12469g00007 620 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 183 619 - -
Vium12469g00007 620 MobiDBLite consensus disorder prediction 129 148 - -
Vium12469g00007 620 Coils Coil 141 175 - -
Vium12469g00007 620 MobiDBLite consensus disorder prediction 437 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium12469g00007 Vium-Chr12469 15567 17955 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12469g00007 91 620 Inorganic Solute Cotransporters AT4G00630 51.032 2.48e-136 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12469g00007 K03455 - gmx:100791174 875.544