Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12469g00004 ATGGATGTAGCTTTTAGGTTACCGCAGTCAAATGTGGTATTGGATGGTTTGGATTCTTGCACTGTATTTGGCGGGAGAGGTTTTTGTTGCGCTTTTCTCGGCAAGTCGAGGACTATTTCGAAGGCTCGTTTTAGTGGAACGAACAAGATAGGTAGTTGGAGTTGTTCGAGAGTAGACTGTTTCGGAGAGTTGAAAGTTTCGAGTGGGAAGAGGAGTATGTGTTGGAAGAGAAATAAACTTTTCAGGGGGAGTAGGAAAATTTGGACAAAGTGTCAGGGTAACGATTCTTTATCATATGTCAATGGCAATGGGCGGAATGTTGATAGGGTGGAAAGTGCGGATGAGGACTCTGGTTCCAGTGCTGAATCTTGTGAATCTTTGGGTGAAAATGGGCAAGAAGGGAGGAAAGAAGCTGGGGGTGAAGTAGCGGAGGATCAAAATGTGGATGAATTGAAAGAACAGCTGCAAAAGGCCAAGAAAGAATTAGAAGCCGCTCGAGAAAACAGCGTTGTATTTGAGGAAAAGGTTAAGAAGATATCAGAGACTGCGATTTTCTTGCAAGATGAAGCAGCAAGTGCTTGGAACAATGTTACTTCTACCCTTGATATCATCCAAGATATTGTGGGTCAAGAATTTGTTGCCAAAGAAGCTGTTCAGAAAGCAACTATGGCCCTTTCTCTGGCTGAGGCAAGGCTTCAAGTAGCCATAGAGTCTTACGAGGCTACAAAAGAAGCTTACGATTCCTCAGAAGGTTCTAACAACATTAATGATGATAAAGACATAATGCAGGAATCGAAGGAACTTTTGGATGCTCAGGAAGATATCAAGGAATGCCAGACAAATTTATCATATTGCGAGGATGAGCTGAGAGGCTTGCAATGTAGAAAGGAGGAGTTGCAGAGTGAAGTGAACAATTTGCATGAAGTTGCAGAACAGGAGCAGCTGAAAGCAGCAAAAGCAGATGAAGATGTTGCAAGCATAATGCTTTTAGCGGAAAAAGCTGTTGCTGCCGAAATTGATGCTGCACAACAGGTGAATGATGCAGAGATTGCATTACAGAAAGCAGAAAAAATTGCCTCTAGTCTTAAAGCTGATACCAAAGACAGTCTACAAGTACAAGAGATTGTAGCTATTCCCGAGGACGAGGAAGTGGGTCAAGGCTTTTCTGGTGATGATGTCGTTAAAAGGGAGGCTGATCTTTCAAATGATGATGAGCTTTTTCTGACCGAAACAAAATCTGACAACAGTAGGCAAAGTTTGGAAGACATGGCACAGTCTGATTATCTGAGTGATCGAGAGAACGGACAATTAAGCTTAGACTCTTCTAAAGAAGCTGAAGTTGAAACAGAGAAGTCAAAGAATGTAGTTCAAACAAAAAAGCAGGAAACACAAAAAGATTTGACTAGAGATAATTCATCATTTTTTCCAAAGGCATTATTGAAGAAATCTTCCCGATTTTTTCCCGCATCATTCTTCTCTTTTACTGCCGATGAGACTGATTACACACCTGCATCAGTTTTCCATGGTCTTATGGAGTCTGCACAGAAGCAACTAGCCAAGCTAATTGTTGGGTTATTGCTAATTGGAGCAGGGCTTGTACTCTATAGCAATAGAGCCGAGAGGGGTGCTCAGCTGCTTCAGCAACCAGAAGTCATTGCAACCACTGTTGAAGAAGTTTCTTCAACTGCAAAGCCTCTGGTTAGAAGGCTTCAGGATCTTCCCAGGAGAATTAAGAAAATCATTGCATCATTACCTGATCAAGAGGTGGATGAGGAGGAAGCCTCCCTCTTTGACATGCTCTGGTTACTCCTTGCAAGTGTTGTATTTGTACCAATTTTTCAAAAGATTCCTGGAGGTAACTAG 1863 0.4214 MDVAFRLPQSNVVLDGLDSCTVFGGRGFCCAFLGKSRTISKARFSGTNKIGSWSCSRVDCFGELKVSSGKRSMCWKRNKLFRGSRKIWTKCQGNDSLSYVNGNGRNVDRVESADEDSGSSAESCESLGENGQEGRKEAGGEVAEDQNVDELKEQLQKAKKELEAARENSVVFEEKVKKISETAIFLQDEAASAWNNVTSTLDIIQDIVGQEFVAKEAVQKATMALSLAEARLQVAIESYEATKEAYDSSEGSNNINDDKDIMQESKELLDAQEDIKECQTNLSYCEDELRGLQCRKEELQSEVNNLHEVAEQEQLKAAKADEDVASIMLLAEKAVAAEIDAAQQVNDAEIALQKAEKIASSLKADTKDSLQVQEIVAIPEDEEVGQGFSGDDVVKREADLSNDDELFLTETKSDNSRQSLEDMAQSDYLSDRENGQLSLDSSKEAEVETEKSKNVVQTKKQETQKDLTRDNSSFFPKALLKKSSRFFPASFFSFTADETDYTPASVFHGLMESAQKQLAKLIVGLLLIGAGLVLYSNRAERGAQLLQQPEVIATTVEEVSSTAKPLVRRLQDLPRRIKKIIASLPDQEVDEEEASLFDMLWLLLASVVFVPIFQKIPGGN 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12469g00004 620 MobiDBLite consensus disorder prediction 108 148 - -
Vium12469g00004 620 Coils Coil 261 316 - -
Vium12469g00004 620 Coils Coil 345 365 - -
Vium12469g00004 620 MobiDBLite consensus disorder prediction 437 466 - -
Vium12469g00004 620 MobiDBLite consensus disorder prediction 129 148 - -
Vium12469g00004 620 Coils Coil 141 175 - -
Vium12469g00004 620 MobiDBLite consensus disorder prediction 427 466 - -
Vium12469g00004 620 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 183 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium12469g00004 Vium-Chr12469 8908 14190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12469g00004 91 620 Inorganic Solute Cotransporters AT4G00630 50.471 1.76e-136 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12469g00004 K03455 - gmx:100791174 874.389