Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1225g00001 ATGGTGGCACAGTTTCACGCGTTTAAACCTAACACAAACGTAATCGGAACGTTCTTCTCCCAAAACGCACGTTTTAAAGAAGTCCTTTCTCTCTTCTTCTTGTTCTTGATCTTCTTCTTGGATTTGCAATCTGTGGTGAAATCTGGTTTGGAATTTGGTGAAGTGGAATCGAAGAGTGTTTCAATGTCGGAAGGGTTTGCGATCGAATTGCACTTGGATCCGGCGTTGGAGAATCAGGTGCTGAAGGCGTGGAACGTTCTCGCGCGCCGGCAAATCACCACTCACCTCATCGAGATGAAGTCGCGCCCTCACATAACGCTCTTCTCCGCACCCTTTCTAGAACCTTCCAAGCTCGAATCGCTTCTCAGAACCTTCGCATCCAACCACGATCCTCTTTCTCTCTCCTTCTCCTCCGTCGGCACCATCCCCAACCAC 435 0.492 MVAQFHAFKPNTNVIGTFFSQNARFKEVLSLFFLFLIFFLDLQSVVKSGLEFGEVESKSVSMSEGFAIELHLDPALENQVLKAWNVLARRQITTHLIEMKSRPHITLFSAPFLEPSKLESLLRTFASNHDPLSLSFSSVGTIPNH 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1225g00001 145 SUPERFAMILY LigT-like 67 143 IPR009097 -
Vium1225g00001 145 PANTHER - 62 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1225g00001 Vium-Chr1225 5 516 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1225g00001 62 141 Calmodulin-binding Proteins AT5G40190 63.750 3.13e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1225g00001 - - vum:124825415 275.404